RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RAB2AP61019 212 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 APOFQ13790 326 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 ZBTB6Q15916 424 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 FBXO48Q5FWF7 155 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 NIPAL1Q6NVV3 410 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 COPS6Q7L5N1 327 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 MRPL52Q86TS9 123 aaKnown RBP2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 NIT1Q86X76 327 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 PHOSPHO2Q8TCD6 241 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 HIST1H2BAQ96A08 127 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 C19orf60Q96EN9 201 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 MRAP2Q96G30 205 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 METTL17Q9H7H0 456 aaPredicted RBP2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 ZNF337Q9Y3M9 751 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 OR51B4Q9Y5P0 310 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 ABCB11O95342 1321 aa2.06□□□□□ -2.08
HMGCS1-207ENST00000514610 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 GOLGA8IPA6NC78 632 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 HADHBP55084 474 aaKnown RBP2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 FOXF1Q12946 379 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 TCF23Q7RTU1 214 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 LRRC6Q86X45 466 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 MFSD8Q8NHS3 518 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 SERPINB11Q96P15 392 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 POTEKPQ9BYX7 375 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 OR51E2Q9H255 320 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 SYNRGQ9UMZ2 1314 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 MYO15BQ96JP2 1530 aa2.05□□□□□ -2.08
HMGCS1-207ENST00000514610 IGHV3OR15-7A0A075B7D8 119 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 GOLGA8QA0A0J9YX86 632 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 C17orf98A8MV24 154 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 CRXO43186 299 aaPredicted RBP2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 GP1BAP07359 652 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 SLC35E2BP0CK96 405 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 MAGEA6P43360 314 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 INPP1P49441 399 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 DYNLL1P63167 89 aaKnown RBP2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 PSG4Q00888 419 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 CACNA1SQ13698 1873 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 FLOT2Q14254 428 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 SPNS3Q6ZMD2 512 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 Q6ZRU5 148 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 OR2V1Q8NHB1 315 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 SUN5Q8TC36 379 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 SPPL2BQ8TCT7 592 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 CCDC124Q96CT7 223 aaKnown RBP2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 ZNF286AQ9HBT8 521 aa2.04□□□□□ -2.08
HMGCS1-207ENST00000514610 CRB1P82279 1406 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 C17orf51A8MQB3 221 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 ZNF879B4DU55 563 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 SLC25A20O43772 301 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 FADS2O95864 444 aaKnown RBP2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 HSPA13P48723 471 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 OR2B6P58173 313 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 RAB31Q13636 194 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 OR8G1Q15617 311 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 ZNF567Q8N184 647 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 DDIT4LQ96D03 193 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 VPREB3Q9UKI3 123 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 HSPE1-MOB4S4R3N1 261 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 LCTP09848 1927 aa2.03□□□□□ -2.08
HMGCS1-207ENST00000514610 RAB3GAP2Q9H2M9 1393 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 KLRC4-KLRK1H3BQV0 150 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 TNFAIP8O95379 198 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 AKR1C4P17516 323 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 CSRP1P21291 193 aaKnown RBP2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 UGT2B10P36537 528 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 MUC15Q8N387 334 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 OR10P1Q8NGE3 313 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 OR8K1Q8NGG5 319 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 OR9I1Q8NGQ6 314 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 OR11L1Q8NGX0 322 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 RORBQ92753 470 aa2.02□□□□□ -2.09
HMGCS1-207ENST00000514610 GPR171O14626 319 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 SNAP29O95721 258 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 GZMHP20718 246 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 CRABP1P29762 137 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 SKP2Q13309 424 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 OR4D1Q15615 310 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 OR5C1Q8NGR4 320 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 ZNRF2Q8NHG8 242 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 CD200R1Q8TD46 325 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 CCDC127Q96BQ5 260 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 MTCH2Q9Y6C9 303 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 CEP170Q5SW79 1584 aa2.01□□□□□ -2.09
HMGCS1-207ENST00000514610 PTPRKQ15262 1439 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 ZNF638Q14966 1978 aaKnown RBP2□□□□□ -2.09
HMGCS1-207ENST00000514610 IGSF23A1L1A6 192 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 NQO2P16083 231 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 TSPAN31Q12999 210 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 EBLN2Q6P2I7 272 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 ZNF322Q6U7Q0 402 aaPredicted RBP2□□□□□ -2.09
HMGCS1-207ENST00000514610 SPERTQ8NA61 448 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 DTD1Q8TEA8 209 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 FAM210AQ96ND0 272 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 CYTH2Q99418 400 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 CACNA1GO43497 2377 aa2□□□□□ -2.09
HMGCS1-207ENST00000514610 LOC102725191A0A1B0GVB3 256 aa1.99□□□□□ -2.09
HMGCS1-207ENST00000514610 SULT1C2O00338 296 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms