RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 FAM27D1Q5T7N8 215 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 SYT6Q5T7P8 510 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-210ENST00000513957 MINOS1Q5TGZ0 78 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 RSBN1Q5VWQ0 802 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-210ENST00000513957 RUSC1-AS1Q66K80 236 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF626Q68DY1 528 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 SLC35E4Q6ICL7 350 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 TRAT1Q6PIZ9 186 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 SLC16A12Q6ZSM3 486 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 C8orf86Q6ZUL3 223 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF554Q86TJ5 538 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 BCL6BQ8N143 479 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-210ENST00000513957 SUMF2Q8NBJ7 301 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 BEND2Q8NDZ0 799 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 OR10K1Q8NGX5 313 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF596Q8TC21 504 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM203Q969S6 136 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 COQ2Q96H96 371 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 NR1H4Q96RI1 486 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-210ENST00000513957 DPCDQ9BVM2 203 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-210ENST00000513957 C19orf24Q9BVV8 132 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 TM2D1Q9BX74 207 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM59Q9BXS4 323 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 ESM1Q9NQ30 184 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 ZNRD1Q9P1U0 126 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 FBLN5Q9UBX5 448 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 STUB1Q9UNE7 303 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 SESN1Q9Y6P5 492 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 MINOS1-NBL1R4GNA1 71 aa6.68□□□□□ -1.34
NEDD4-210ENST00000513957 IGHV3OR16-10A0A075B7F0 116 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 A0A087WXM4 84 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 MEIKINA0A087WXM9 373 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 MEIOCA2RUB1 952 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 ODF3BA8MYP8 253 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 PDCD6O75340 191 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 CRTAPO75718 401 aaPredicted RBP6.67□□□□□ -1.34
NEDD4-210ENST00000513957 IL1AP01583 271 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 MELTFP08582 738 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 VSIG8P0DPA2 414 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 CALCBP10092 127 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 ARSBP15848 533 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 GZMHP20718 246 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 FUT3P21217 361 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 ARHGDIBP52566 201 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 RPS27AP62979 156 aaKnown RBP6.67□□□□□ -1.34
NEDD4-210ENST00000513957 INSL4Q14641 139 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 SLC9A3R2Q15599 337 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 TAF9Q16594 264 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 HCP5Q6MZN7 132 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 GDPGP1Q6ZNW5 385 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 TPRA1Q86W33 373 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 LYSMD2Q8IV50 215 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 GAPTQ8N292 157 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 DTX3Q8N9I9 347 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 DYRK2Q92630 601 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 MALSU1Q96EH3 234 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 URM1Q9BTM9 101 aaKnown RBP6.67□□□□□ -1.34
NEDD4-210ENST00000513957 CLEC7AQ9BXN2 247 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 SELENOIQ9C0D9 397 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 MEGF9Q9H1U4 602 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 PPIL3Q9H2H8 161 aaKnown RBP6.67□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM133Q9H2Q1 129 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF696Q9H7X3 374 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 PLGRKTQ9HBL7 147 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 V9GY05 133 aa6.67□□□□□ -1.34
NEDD4-210ENST00000513957 IGHV2-26A0A0B4J1V2 119 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 A0A0U1RQK1 487 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 A0A1B0GUS0 222 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 A0A1W2PP11 408 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 VGLL3A8MV65 326 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM14DPA8MWL7 114 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 NPIPB11E5RHQ5 1161 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 HSPB6O14558 160 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 HOXA3O43365 443 aaPredicted RBP6.66□□□□□ -1.34
NEDD4-210ENST00000513957 ORC5O43913 435 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 CGB3P0DN86 165 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 CGB7P0DN87 165 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 HKR1P10072 659 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 GLP1RP43220 463 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 IER3P46695 156 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 GLIPR1P48060 266 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 DYNLT3P51808 116 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 ACTG1P63261 375 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 QRFPP83859 136 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 FOXL1Q12952 345 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 KLRD1Q13241 179 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 RAB11BQ15907 218 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 ATAD3CQ5T2N8 411 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 C6orf183Q5T699 404 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 RAB12Q6IQ22 244 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 C16orf87Q6PH81 154 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF782Q6ZMW2 699 aaPredicted RBP6.66□□□□□ -1.34
NEDD4-210ENST00000513957 ZNF497Q6ZNH5 498 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TPRX1Q8N7U7 411 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TMEM104Q8NE00 496 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TSPAN14Q8NG11 270 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 OR52M1Q8NGK5 317 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms