RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ZNF281Q9Y2X9 895 aa13.86□□□□□ -0.19
HMGCL-209ENST00000513148 VWC2LB2RUY7 222 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 SIGLEC5O15389 551 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM33P57088 247 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 RPS11P62280 158 aaKnown RBP eCLIP13.85□□□□□ -0.19
HMGCL-209ENST00000513148 UBE2V2Q15819 145 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 FAM201AQ5SY85 155 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 SLC16A13Q7RTY0 426 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 IZUMO1Q8IYV9 350 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 BOLLQ8N9W6 283 aaKnown RBP13.85□□□□□ -0.19
HMGCL-209ENST00000513148 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 GPR148Q8TDV2 347 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 CR1P17927 2039 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 FAM230AA0A1W2PPH8 454 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 LRRC30A6NM36 301 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 IRF2P14316 349 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 GNG3P63215 75 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 C11orf87Q6NUJ2 197 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 OR11L1Q8NGX0 322 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 PP6455Q8WZ26 134 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 C10orf35Q96D05 121 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 TIMD4Q96H15 378 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 TUBA4BQ9H853 241 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 MMP26Q9NRE1 261 aa13.85□□□□□ -0.19
HMGCL-209ENST00000513148 AK6Q9Y3D8 172 aaKnown RBP13.85□□□□□ -0.19
HMGCL-209ENST00000513148 IGHV4-61A0A0C4DH41 118 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM272A0A1B0GTI8 110 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM178BH3BS89 294 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 CDIPTO14735 213 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 WNT9BO14905 357 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 PTBP3O95758 552 aaKnown RBP13.84□□□□□ -0.19
HMGCL-209ENST00000513148 LUMP51884 338 aaPredicted RBP13.84□□□□□ -0.19
HMGCL-209ENST00000513148 PEG10Q86TG7 708 aaKnown RBP13.84□□□□□ -0.19
HMGCL-209ENST00000513148 OR5A2Q8NGI9 324 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 OR13C9Q8NGT0 318 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 TMEM106AQ96A25 262 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 TLNRD1Q9H1K6 362 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 V9GY05 133 aa13.84□□□□□ -0.19
HMGCL-209ENST00000513148 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 TMEM210A6NLX4 147 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 TAS2R20P59543 309 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 LY6G6FQ5SQ64 297 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 C11orf88Q6PI97 169 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 STX12Q86Y82 276 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 SCCPDHQ8NBX0 429 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 Q8TCH9 128 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 TCTEX1D2Q8WW35 142 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 RAB1CQ92928 201 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 ERGIC1Q969X5 290 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 SLC25A21Q9BQT8 299 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-209ENST00000513148 SLC7A11Q9UPY5 501 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 OR5B21A6NL26 309 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 C3orf80F5H4A9 247 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 F8VVB4 439 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 F8VWA3 439 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 XRCC3O43542 346 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 RCC1P18754 421 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-209ENST00000513148 USF1P22415 310 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-209ENST00000513148 CNN3Q15417 329 aaKnown RBP13.83□□□□□ -0.2
HMGCL-209ENST00000513148 C11orf53Q8IXP5 236 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 C1orf87Q8N0U7 546 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 C2CD4CQ8TF44 421 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 RNF141Q8WVD5 230 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 SLC25A28Q96A46 364 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 OR14A2Q96R54 314 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 WDR13Q9H1Z4 485 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 TMPRSS5Q9H3S3 457 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 RNF7Q9UBF6 113 aa13.83□□□□□ -0.2
HMGCL-209ENST00000513148 A0A096LNT2 108 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 IGKV1-9A0A0C4DH69 117 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 CD2P06729 351 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 AKAIN1P0CW23 69 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 CD99P14209 185 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 CDK2P24941 298 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 PNLIPRP3Q17RR3 467 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 WDR82Q6UXN9 313 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 OR5M8Q8NGP6 311 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 LRRC29Q8WV35 223 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 DERL3Q96Q80 235 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF471Q9BX82 626 aaPredicted RBP13.82□□□□□ -0.2
HMGCL-209ENST00000513148 OR51I2Q9H344 312 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 COMMD9Q9P000 198 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 HIVEP1P15822 2718 aa13.82□□□□□ -0.2
HMGCL-209ENST00000513148 A0A1W2PPK0 400 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 IFNL4K9M1U5 179 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 RHBDL1O75783 438 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 IGHV2-5P01817 119 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 RLN1P04808 185 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 CFPP27918 469 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 CD80P33681 288 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 NPBWR1P48145 328 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 Q499Y3 187 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 RAB12Q6IQ22 244 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 ANGPTL5Q86XS5 388 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 OR5D14Q8NGL3 314 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 OR4C16Q8NGL9 310 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms