RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 A0A1W2PRM7 423 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 PGPA6NDG6 321 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SUPT3HB4E1H0 165 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SEC14L6B5MCN3 397 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 GOLGA8TH3BQL2 631 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 WRBO00258 174 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 MYO1DO94832 1006 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SNX4O95219 450 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 IGKV1D-12P01611 117 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 KLK1P06870 262 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 OR8G3PP0DMU2 310 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF3P17036 446 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ATF1P18846 271 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 PPP1CCP36873 323 aaKnown RBP0.1□□□□□ -2.39
PDGFC-208ENST00000512711 CBX5P45973 191 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 TAS2R60P59551 318 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 BSPH1Q075Z2 132 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SURF2Q15527 256 aaPredicted RBP0.1□□□□□ -2.39
PDGFC-208ENST00000512711 MMDQ15546 238 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 PSG3Q16557 428 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ATP6V1FQ16864 119 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 NDUFAF6Q330K2 333 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 PLCXD3Q63HM9 321 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ULK3Q6PHR2 472 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 Q6ZTI0 123 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 TPGS1Q6ZTW0 290 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 OLIG3Q7RTU3 272 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 OR2W3Q7Z3T1 314 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 GLT6D1Q7Z4J2 308 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 KRTAP19-3Q7Z4W3 81 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 KATNAL2Q8IYT4 538 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ZNF283Q8N7M2 679 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 GATD1Q8NB37 220 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 OR8B12Q8NGG6 310 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 OR10A6Q8NH74 314 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 SPACA4Q8TDM5 124 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 RNF133Q8WVZ7 376 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 FGF13Q92913 245 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 NAT6Q93015 286 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 CERS2Q96G23 380 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ODF3Q96PU9 254 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 IL22Q9GZX6 179 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 ALX4Q9H161 411 aaPredicted RBP0.1□□□□□ -2.39
PDGFC-208ENST00000512711 HAUS4Q9H6D7 363 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 LZTFL1Q9NQ48 299 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 NMRK1Q9NWW6 199 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 STK38LQ9Y2H1 464 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 MYH11P35749 1972 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 CLUHO75153 1309 aa0.1□□□□□ -2.39
PDGFC-208ENST00000512711 RYR1P21817 5038 aa0.09□□□□□ -2.39
PDGFC-208ENST00000512711 RNF213Q63HN8 5207 aa0.09□□□□□ -2.39
PDGFC-208ENST00000512711 IGHV2-26A0A0B4J1V2 119 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 IGHV3-73A0A0B4J1V6 119 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 TRAV25A0A0B4J276 109 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 LOC100653049A0A140TA62 436 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 TVP23AA6NH52 213 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 C11orf86A6NJI1 115 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 B4DEV8 164 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 TCF21O43680 179 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 KRT34O76011 436 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 LY6HO94772 140 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 SOX14O95416 240 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CA2P00918 260 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CRPP02741 224 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 IGKV5-2P06315 115 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 SLC25A16P16260 332 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 PSMA1P25786 263 aaKnown RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CCR7P32248 378 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 PYCR1P32322 319 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 GTF2H1P32780 548 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 P2RY2P41231 377 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 HSPA13P48723 471 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 INPP1P49441 399 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CLDN18P56856 261 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 RAB2AP61019 212 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 HOXC5Q00444 222 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 DYNC1I2Q13409 638 aaKnown RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CDK5R1Q15078 307 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 NNATQ16517 81 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CEACAM16Q2WEN9 425 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 DEFB115Q30KQ5 88 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM155Q4W5P6 130 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 GAPTQ8N292 157 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 TRIML2Q8N7C3 387 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 DRAXINQ8NBI3 349 aaPredicted RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 PROKR2Q8NFJ6 384 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 OR11H1Q8NG94 326 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 LHFPL5Q8TAF8 219 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 NELFBQ8WX92 580 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CENPNQ96H22 339 aaPredicted RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 Q96M85 177 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 NAP1L5Q96NT1 182 aaPredicted RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 VAT1Q99536 393 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CHRNA10Q9GZZ6 450 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 OR2AG1Q9H205 316 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 FBXL15Q9H469 300 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 SMDT1Q9H4I9 107 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 C8orf33Q9H7E9 229 aaPredicted RBP0.09□□□□□ -2.4
PDGFC-208ENST00000512711 AUNIPQ9H7T9 357 aa0.09□□□□□ -2.4
PDGFC-208ENST00000512711 CRLF2Q9HC73 371 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms