RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TRBV5-7A0A0A0MS05 114 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 M0QZK8 103 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 GNAO1P09471 354 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 PF4V1P10720 104 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 CD33P20138 364 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 RAB7AP51149 207 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 LOXL3P58215 753 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 ST3GAL4Q11206 333 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 HES1Q14469 280 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 HNF4GQ14541 408 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 MPV17LQ2QL34 196 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 LINC00596Q86U02 117 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 C5orf56Q8N8D9 126 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 SETD9Q8NE22 299 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 OR4X2Q8NGF9 303 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 SGCDQ92629 289 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 OR14A2Q96R54 314 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 S100A13Q99584 98 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 NECAP2Q9NVZ3 263 aa12.13□□□□□ -0.47
COL1A1-213ENST00000511732 PAK1IP1Q9NWT1 392 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-213ENST00000511732 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-213ENST00000511732 IGHV3-43A0A0B4J1X8 118 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 PIN1P1O15428 100 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 ZNF780AO75290 641 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-213ENST00000511732 MT-ND4P03905 459 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 IGHV3-43DP0DP04 118 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 GTF2F2P13984 249 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 TMEM11P17152 192 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 FSTP19883 344 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 GZMHP20718 246 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 REG1BP48304 166 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-213ENST00000511732 ZNF497Q6ZNH5 498 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 ZNF329Q86UD4 541 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 LYPD6Q86Y78 171 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 OR8H3Q8N146 312 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 PACRGLQ8N7B6 248 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 MRAPQ8TCY5 172 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 ARL11Q969Q4 196 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 MUL1Q969V5 352 aa12.12□□□□□ -0.47
COL1A1-213ENST00000511732 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-213ENST00000511732 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
COL1A1-213ENST00000511732 RCC2Q9P258 522 aaKnown RBP12.12□□□□□ -0.47
COL1A1-213ENST00000511732 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 SDCBPO00560 298 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-213ENST00000511732 HSD17B6O14756 317 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 MAS1P04201 325 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 EBI3Q14213 229 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 RCN1Q15293 331 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 GLIPR1L1Q6UWM5 242 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 LINC00311Q8N616 119 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 NEK7Q8TDX7 302 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
COL1A1-213ENST00000511732 C8orf4Q9NR00 106 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 GFOD1Q9NXC2 390 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
COL1A1-213ENST00000511732 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
COL1A1-213ENST00000511732 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 C12orf77C9JDV5 145 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 AIPO00170 330 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 CCRL2O00421 344 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 SLC31A2O15432 143 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 FGF16O43320 207 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 ORC5O43913 435 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 PF4P02776 101 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 CAPGP40121 348 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 VHLP40337 213 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 MED21Q13503 144 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 SYT6Q5T7P8 510 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-213ENST00000511732 C18orf65Q6ZTR6 163 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 AHSA2Q719I0 299 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 Q8N6K4 173 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-213ENST00000511732 DERL3Q96Q80 235 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 BANF2Q9H503 90 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 CNOT2Q9NZN8 540 aaKnown RBP12.1□□□□□ -0.47
COL1A1-213ENST00000511732 CKLFQ9UBR5 152 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 NOTCH3Q9UM47 2321 aa12.1□□□□□ -0.47
COL1A1-213ENST00000511732 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
COL1A1-213ENST00000511732 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
COL1A1-213ENST00000511732 CELP19835 753 aa12.09□□□□□ -0.47
COL1A1-213ENST00000511732 ZNF134P52741 427 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms