RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 ALX4Q9H161 411 aaPredicted RBP1.47□□□□□ -2.17
CHD1-207ENST00000511628 CARHSP1Q9Y2V2 147 aaKnown RBP1.47□□□□□ -2.17
CHD1-207ENST00000511628 PTPRKQ15262 1439 aa1.47□□□□□ -2.17
CHD1-207ENST00000511628 ZBED9Q6R2W3 1325 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 USP42Q9H9J4 1324 aaKnown RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 IGKV1-12A0A0C4DH73 117 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 A0A1B0GU33 70 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 EFCAB9A8MZ26 197 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 LECT2O14960 151 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 AQP9O43315 295 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 ADAP1O75689 374 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 ASS1P00966 412 aaKnown RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 IGKV1D-12P01611 117 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 LGALS3P17931 250 aaKnown RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 COILP38432 576 aaPredicted RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 CBX5P45973 191 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 CD151P48509 253 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 ZNHIT3Q15649 155 aaPredicted RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 BCL2A1Q16548 175 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 RBM48Q5RL73 367 aaKnown RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 TIMM23BQ5SRD1 257 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 Q6ZQT7 251 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 TCF23Q7RTU1 214 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 KRTCAP2Q8N6L1 136 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 LY6G5BQ8NDX9 201 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 SUN5Q8TC36 379 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 KCTD4Q8WVF5 259 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 APOBEC3DQ96AK3 386 aaPredicted RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 CLDN23Q96B33 292 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 CMBLQ96DG6 245 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 SLC25A44Q96H78 314 aaPredicted RBP1.46□□□□□ -2.18
CHD1-207ENST00000511628 PYURFQ96I23 114 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 ASCL3Q9NQ33 180 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 DMAC2Q9NW81 257 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 NAGKQ9UJ70 344 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 LINC00588Q9Y4M8 146 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 NACADO15069 1562 aa1.46□□□□□ -2.18
CHD1-207ENST00000511628 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 CDK14O94921 469 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 SOX14O95416 240 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 GPR75O95800 540 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 LTAP01374 205 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 ZNF22P17026 224 aaPredicted RBP1.45□□□□□ -2.18
CHD1-207ENST00000511628 AKR1C4P17516 323 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 CRABP2P29373 138 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 DEFA6Q01524 100 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 MMDQ15546 238 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 ZCWPW2Q504Y3 356 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 SCXQ7RTU7 201 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 CPNE9Q8IYJ1 553 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 HS3ST5Q8IZT8 346 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 BLIDQ8IZY5 108 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 YIPF7Q8N8F6 280 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 BPIFB6Q8NFQ5 453 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 OR9I1Q8NGQ6 314 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 ARL6Q9H0F7 186 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 ABCG5Q9H222 651 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 KCNIP2Q9NS61 270 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 EURLQ9NYK6 297 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 SLC23A2Q9UGH3 650 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 CD300AQ9UGN4 299 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 PHLDA3Q9Y5J5 127 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 GMEB1Q9Y692 573 aa1.45□□□□□ -2.18
CHD1-207ENST00000511628 LRPPRCP42704 1394 aaKnown RBP1.45□□□□□ -2.18
CHD1-207ENST00000511628 LCTP09848 1927 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 CACNA1SQ13698 1873 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 SHANK3Q9BYB0 1731 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 TRBV24-1A0A075B6N3 115 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 A0A1W2PNM2 257 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 ARGFXA6NJG6 315 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 D6RAR5 112 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 TOR1AO14656 332 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 SH2D1AO60880 128 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 ACTR1BP42025 376 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 HSPA13P48723 471 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 INPP1P49441 399 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 STC1P52823 247 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 RAB8AP61006 207 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 DMTNQ08495 405 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 SKP2Q13309 424 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 C10orf91Q5T1B1 145 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 CLEC6AQ6EIG7 209 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 HCP5Q6MZN7 132 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 NIPAL1Q6NVV3 410 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 EBLN2Q6P2I7 272 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 VN1R4Q7Z5H5 301 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 CRLF3Q8IUI8 442 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 C2orf73Q8N5S3 287 aaPredicted RBP1.44□□□□□ -2.18
CHD1-207ENST00000511628 FER1L6-AS1Q8NA97 138 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 OR5D18Q8NGL1 313 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 LMX1AQ8TE12 382 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 OR5P3Q8WZ94 311 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 UPF3BQ9BZI7 483 aaKnown RBP1.44□□□□□ -2.18
CHD1-207ENST00000511628 ZNF286AQ9HBT8 521 aa1.44□□□□□ -2.18
CHD1-207ENST00000511628 RPUSD1Q9UJJ7 312 aaKnown RBP1.44□□□□□ -2.18
CHD1-207ENST00000511628 NUP153P49790 1475 aaKnown RBP1.43□□□□□ -2.18
CHD1-207ENST00000511628 MAP3K19Q56UN5 1328 aa1.43□□□□□ -2.18
CHD1-207ENST00000511628 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms