RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
DDX41-212ENST00000511040 MINOS1-NBL1R4GNA1 71 aa11.29□□□□□ -0.6
DDX41-212ENST00000511040 TRDV1A0A1B0GX56 115 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 SMIM30A4D0T7 59 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A22PA8MWA6 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A12PA8MX19 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A5PA8MXJ8 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 NPIPB11E5RHQ5 1161 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 SLC17A2O00624 439 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 PDCD6O75340 191 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 NDUFA7O95182 113 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A15PP0C7V4 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A13PP0C7W8 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A14PP0C7W9 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FAM90A24PP0C7X0 464 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 CD34P28906 385 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 GNG10P50151 68 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
DDX41-212ENST00000511040 NEDD8Q15843 81 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 HES5Q5TA89 166 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 CD200R1LQ6Q8B3 271 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 KCNG3Q8TAE7 436 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 ZNF596Q8TC21 504 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 ABCB10Q9NRK6 738 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 TRAPPC2LQ9UL33 140 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 TENM1Q9UKZ4 2725 aa11.28□□□□□ -0.6
DDX41-212ENST00000511040 A0A087X0M5 115 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 A0A0A6YYD4 124 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 A0A1B0GX30 115 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 VGLL3A8MV65 326 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 CHST1O43916 411 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 IGLV1-47P01700 117 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 ARSBP15848 533 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 MYL9P24844 172 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 PRRX1P54821 245 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 AANATQ16613 207 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 SYT6Q5T7P8 510 aaPredicted RBP11.27□□□□□ -0.61
DDX41-212ENST00000511040 Q6ZSV7 163 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 C5orf24Q7Z6I8 188 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 OR51D1Q8NGF3 324 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 OR9G1Q8NH87 305 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 NEDD4LQ96PU5 975 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 SULT4A1Q9BR01 284 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 FAAP24Q9BTP7 215 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 ZNF747Q9BV97 191 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 BEX1Q9HBH7 125 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 V9GY05 133 aa11.27□□□□□ -0.61
DDX41-212ENST00000511040 IGHV3-43A0A0B4J1X8 118 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 TRAV1-2A0A0B4J238 106 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 LEUTXA8MZ59 168 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 F2RL2O00254 374 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
DDX41-212ENST00000511040 IGHV3-43DP0DP04 118 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 RCC1P18754 421 aaPredicted RBP11.26□□□□□ -0.61
DDX41-212ENST00000511040 GZMHP20718 246 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 CD24P25063 80 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 CHATP28329 748 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
DDX41-212ENST00000511040 SRSF4Q08170 494 aaKnown RBP11.26□□□□□ -0.61
DDX41-212ENST00000511040 PLA2G7Q13093 441 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 HLA-DRB5Q30154 266 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 OLFML2AQ68BL7 652 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 CCBE1Q6UXH8 406 aaPredicted RBP11.26□□□□□ -0.61
DDX41-212ENST00000511040 PRR18Q8N4B5 295 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 OR1L1Q8NH94 360 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 FAM3DQ96BQ1 224 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 PSG11Q9UQ72 335 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
DDX41-212ENST00000511040 A0A0B4J203 849 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 A6NDX4 124 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 J3QR06 171 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 PDCD5O14737 125 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 SOCS1O15524 211 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 GLAP06280 429 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 BLVRBP30043 206 aaPredicted RBP11.25□□□□□ -0.61
DDX41-212ENST00000511040 C2orf76Q3KRA6 126 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 TPTE2P1Q5T6R2 138 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 OR2W3Q7Z3T1 314 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms