RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CLDN18P56856 261 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ZNF77Q15935 545 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 C6orf15Q6UXA7 325 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 SLC25A22Q9H936 323 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 CLN8Q9UBY8 286 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 OR2W1Q9Y3N9 320 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 MTCH2Q9Y6C9 303 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 HLA-DRB1P01911 266 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 DEFB133Q30KQ1 61 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 LIMS2Q7Z4I7 341 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 SLC37A2Q8TED4 501 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 MOB3AQ96BX8 217 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 TBC1D29Q9UFV1 150 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 ING1Q9UK53 422 aaPredicted RBP7.4□□□□□ -1.22
HTT-208ENST00000510626 MYO18BQ8IUG5 2567 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 PARP14Q460N5 1801 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
HTT-208ENST00000510626 CD74P04233 296 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
HTT-208ENST00000510626 TIAL1Q01085 375 aaKnown RBP eCLIP7.4□□□□□ -1.22
HTT-208ENST00000510626 IL36GQ9NZH8 169 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 MRM2Q9UI43 246 aaKnown RBP7.4□□□□□ -1.22
HTT-208ENST00000510626 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 ZNF646O15015 1829 aaPredicted RBP7.4□□□□□ -1.22
HTT-208ENST00000510626 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 OR4C45A6NMZ5 311 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 PQLC2Q6ZP29 291 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 MRPL37Q9BZE1 423 aaKnown RBP7.4□□□□□ -1.22
HTT-208ENST00000510626 HSF4Q9ULV5 492 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 TCRBV16S1A1N1A0A5B0 115 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 LINC01553A4QN01 128 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 NGFRP08138 427 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 ISG15P05161 165 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 GZMHP20718 246 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 CYB561D1Q8N8Q1 229 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 OR2V1Q8NHB1 315 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 ADAT3Q96EY9 351 aaPredicted RBP7.4□□□□□ -1.22
HTT-208ENST00000510626 ODAMA1E959 279 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 EDIL3O43854 480 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 CRYAAP02489 173 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 EMDP50402 254 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 IZUMO4Q1ZYL8 232 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 TBC1D26Q86UD7 250 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 C7orf71A4D174 169 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 VASH2Q86V25 355 aa7.4□□□□□ -1.22
HTT-208ENST00000510626 A0A0U1RQV5 110 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 A0A1B0GW64 132 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 IDSB3KWA1 339 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 ETHE1O95571 254 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 CA2P00918 260 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 IL11RAQ14626 422 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 OR13G1Q8NGZ3 307 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 MRPL30Q8TCC3 161 aaKnown RBP7.4□□□□□ -1.23
HTT-208ENST00000510626 CES1P1Q9UKY3 287 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 LMX1BO60663 402 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 SFTPCP11686 197 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 SNRNP40Q96DI7 357 aaKnown RBP7.4□□□□□ -1.23
HTT-208ENST00000510626 ZNF236Q9UL36 1845 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 ZNF785A8K8V0 405 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 SLC35B1P78383 322 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 TWIST1Q15672 202 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 AUP1Q9Y679 476 aa7.4□□□□□ -1.23
HTT-208ENST00000510626 TMEM202A6NGA9 273 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 ACAA2P42765 397 aaKnown RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 ZNF660Q6AZW8 331 aaPredicted RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 LANCL2Q9NS86 450 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 ZNF716A6NP11 495 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 FCMRO60667 390 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 CEBPDP49716 269 aaPredicted RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 LPAR5Q9H1C0 372 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 ZBP1Q9H171 429 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 NDUFAF3Q9BU61 184 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 ELOVL1Q9BW60 279 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 RPS11P62280 158 aaKnown RBP eCLIP7.39□□□□□ -1.23
HTT-208ENST00000510626 RPL30P62888 115 aaKnown RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 GUCD1Q96NT3 240 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 ICAM5Q9UMF0 924 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 SELENOTP62341 195 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 RAB9AP51151 201 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 TMEM50BP56557 158 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 ZNF816Q0VGE8 651 aaPredicted RBP7.39□□□□□ -1.23
HTT-208ENST00000510626 AGERQ15109 404 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 C5orf17Q8NAS9 161 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 OR1L8Q8NGR8 309 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 HSPB7Q9UBY9 170 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 LTC4SQ16873 150 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 LTB4R2Q9NPC1 389 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 LMO7DNF2Z398 122 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 CD300CQ08708 224 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 FZD5Q13467 585 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 AQP3Q92482 292 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 R3HDM4Q96D70 268 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 MIEN1Q9BRT3 115 aa7.39□□□□□ -1.23
HTT-208ENST00000510626 TRBV5-5A0A0J9YX44 114 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms