RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
USP38-202ENST00000510377 MOB3AQ96BX8 217 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 BOD1Q96IK1 185 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 THOC3Q96J01 351 aaKnown RBP12.88□□□□□ -0.35
USP38-202ENST00000510377 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 E9PLN8 166 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 PATE3B3GLJ2 98 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 OBSL1O75147 1896 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 CDX1P47902 265 aaPredicted RBP12.87□□□□□ -0.35
USP38-202ENST00000510377 ARG2P78540 354 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 CFHR1Q03591 330 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 GAMTQ14353 236 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 TMEM241Q24JQ0 296 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 OR2H1Q9GZK4 316 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 SERTAD4Q9NUC0 356 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 TMEM38BQ9NVV0 291 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 SYNGR2O43760 224 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 PITX3O75364 302 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 TRGC1P0CF51 173 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 FGF7P21781 194 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 GALR1P47211 349 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 RFESDQ8TAC1 157 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 WFIKKN1Q96NZ8 548 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 A0A1B0GV90 55 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 RAC3P60763 192 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 CATR1Q13166 79 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 GINS3Q9BRX5 216 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 GPR87Q9BY21 358 aa12.87□□□□□ -0.35
USP38-202ENST00000510377 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
USP38-202ENST00000510377 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
USP38-202ENST00000510377 OR8U8P0C7N1 319 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 LIFP15018 202 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 TMEM211Q6ICI0 200 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 ZNF818PQ6ZRF7 136 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 A0A1W2PR77 199 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 UBE2CO00762 179 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 CNEP1R1Q8N9A8 125 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 Q8WTZ3 238 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 ZNF407Q9C0G0 2248 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 H2BFWTQ7Z2G1 175 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 CADM4Q8NFZ8 388 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 NPIPB13A6NJU9 1138 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 NPIPB4C9JG80 1138 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 CEACAM6P40199 344 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 BSXQ3C1V8 233 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 SPNS3Q6ZMD2 512 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
USP38-202ENST00000510377 IGHV5-10-1A0A0J9YXX1 117 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 PTBP3O95758 552 aaKnown RBP12.85□□□□□ -0.35
USP38-202ENST00000510377 IGHV3-13P01766 116 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 IGHV3-7P01780 117 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 RPL19P84098 196 aaKnown RBP12.85□□□□□ -0.35
USP38-202ENST00000510377 FFAR4Q5NUL3 377 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 WDR74Q6RFH5 385 aaPredicted RBP12.85□□□□□ -0.35
USP38-202ENST00000510377 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 OR10V1Q8NGI7 309 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
USP38-202ENST00000510377 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 PRSS50Q9UI38 385 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 RNF224P0DH78 156 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 HTD2P86397 168 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 C3AR1Q16581 482 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 TMEM9BQ9NQ34 198 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 TP53TG5Q9Y2B4 290 aa12.85□□□□□ -0.35
USP38-202ENST00000510377 DEFB108AA8MXU0 73 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 EDDM3BP56851 147 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 KHDC3LQ587J8 217 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 C10orf35Q96D05 121 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 IL36RNQ9UBH0 155 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 RPL36A-HNRNPH2H7BZ11 118 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 BCL2P10415 239 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 ERVK-16P61578 105 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 ZNF385CQ66K41 422 aaPredicted RBP12.84□□□□□ -0.35
USP38-202ENST00000510377 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
USP38-202ENST00000510377 Q9N2K0 584 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms