RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CLCC1Q96S66 551 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 DLL3Q9NYJ7 618 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 IL17BQ9UHF5 180 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 FBXO7Q9Y3I1 522 aa15.29■□□□□ 0.04
CCHCR1-228ENST00000509552 MED19A0JLT2 244 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 DEGS1O15121 323 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 IL18BPO95998 194 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 CD59P13987 128 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 FOLR2P14207 255 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 AKR1C3P42330 323 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 ZNF324BQ6AW86 544 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 ZNF880Q6PDB4 577 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 C17orf78Q8N4C9 275 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 MDS2Q8NDY4 140 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 GNPNAT1Q96EK6 184 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 OR51I2Q9H344 312 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 TECTAO75443 2155 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 ZNF407Q9C0G0 2248 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 A0A1B0GV50 99 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 A0A1B0GW64 132 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 C7orf77A4D0Y5 90 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 J3QT63 122 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 CHST1O43916 411 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 SERPINE2P07093 398 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 SPINK2P20155 84 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 PPP1CCP36873 323 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 RPL35P42766 123 aaKnown RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 DYNLT3P51808 116 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 RAB5BP61020 215 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 MDP1Q86V88 176 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 TMEM171Q8WVE6 324 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 BCL2L2Q92843 193 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 SMDT1Q9H4I9 107 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 IFT22Q9H7X7 185 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 ERRFI1Q9UJM3 462 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 LIPGQ9Y5X9 500 aa15.28■□□□□ 0.04
CCHCR1-228ENST00000509552 CST7O76096 145 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 H1FOOQ8IZA3 346 aaPredicted RBP15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 ZFP62Q8NB50 900 aaPredicted RBP15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 PLPPR1Q8TBJ4 325 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 C2CD4CQ8TF44 421 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 CABLES2Q9BTV7 478 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 RTL8AQ9BWD3 113 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 DEFB127Q9H1M4 99 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 GLRX2Q9NS18 164 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 DNAJC13O75165 2243 aa15.27■□□□□ 0.04
CCHCR1-228ENST00000509552 LRP5LA4QPB2 252 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 SP9P0CG40 484 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 TBC1D28Q2M2D7 210 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 SPATA46Q5T0L3 261 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 ZFP82Q8N141 532 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 TMEM217Q8N7C4 229 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 OR8G5Q8NG78 346 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 CD300LFQ8TDQ1 290 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 IL1F10Q8WWZ1 152 aa15.27■□□□□ 0.03
CCHCR1-228ENST00000509552 RHBDL1O75783 438 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 NXPH3O95157 252 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 MDH2P40926 338 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 IQCF2Q8IXL9 164 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 OR51H1Q8NH63 302 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 EGLN1Q9GZT9 426 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 TUBA4BQ9H853 241 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 A0A1B0GU03 582 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 BTBD17A6NE02 478 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 TNFSF15O95150 251 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 TMEM50AO95807 157 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 OR8G1Q15617 311 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 OR10V1Q8NGI7 309 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 RNASE11Q8TAA1 199 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 TAAR3PQ9P1P4 343 aa15.26■□□□□ 0.03
CCHCR1-228ENST00000509552 TRGV5A0A0B4J1U4 118 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 C1orf196B1AJZ1 125 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 GPR37O15354 613 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 MT-ND4LP03901 98 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 SLC25A6P12236 298 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 EPHA1P21709 976 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 PTAFRP25105 342 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 RPL23AP62750 156 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 MRPL49Q13405 166 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 RHEBQ15382 184 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 RNF212Q495C1 297 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 MOB1BQ7L9L4 216 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 STX12Q86Y82 276 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 Q8IYB0 196 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 OR1J1Q8NGS3 322 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 HIST1H2BAQ96A08 127 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 WDYHV1Q96HA8 205 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 C20orf24Q9BUV8 137 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 COL6A3P12111 3177 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 J3QW42 95 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 SLC33A1O00400 549 aaPredicted RBP15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 OR13C7P0DN81 318 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 LOXL4Q96JB6 756 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 ATP5SQ99766 215 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 GP6Q9HCN6 339 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 TREM2Q9NZC2 230 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 POLDIP2Q9Y2S7 368 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 RNF115Q9Y4L5 304 aa15.25■□□□□ 0.03
CCHCR1-228ENST00000509552 RFNGQ9Y644 331 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms