RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SPATA31B1PQ5VZV4 182 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RTL6Q6ICC9 239 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TNFAIP8L2Q6P589 184 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TRIM40Q6P9F5 258 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SPSB3Q6PJ21 355 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 Q6ZSR6 202 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 FAM231DQ6ZW35 169 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TMUB2Q71RG4 321 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SERPINA11Q86U17 422 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GPD1LQ8N335 351 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 WDR31Q8NA23 367 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 PLPP5Q8NEB5 264 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 DUSP18Q8NEJ0 188 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF548Q8NEK5 533 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 OR52E2Q8NGJ4 325 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 OR1S2Q8NGQ3 325 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 OR1J2Q8NGS2 313 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CT45A3Q8NHU0 189 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 HMGCLL1Q8TB92 370 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 PIFOQ8TCI5 191 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF675Q8TD23 568 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM174Q8WUU8 243 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 DYRK2Q92630 601 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RDH5Q92781 318 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 UBE2E3Q969T4 207 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RSPRY1Q96DX4 576 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TRIB3Q96RU7 358 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 DPCDQ9BVM2 203 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GATA5Q9BWX5 397 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A39Q9BZJ4 359 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SMIM3Q9BZL3 60 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GTSF1LQ9H1H1 148 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 VSIRQ9H7M9 311 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 Q9H8V8 135 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SFXN1Q9H9B4 322 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 C3orf14Q9HBI5 128 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 EXOSC4Q9NPD3 245 aaKnown RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 STARD5Q9NSY2 213 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 HRASLS2Q9NWW9 162 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 DLL3Q9NYJ7 618 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 OR5AC2Q9NZP5 309 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GALPQ9UBC7 116 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RPS6KB2Q9UBS0 482 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 MYH4Q9Y623 1939 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 COL16A1Q07092 1604 aaPredicted RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ATP6AP2A0A1C7CYW4 349 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 FAM231BA6NCW3 169 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 OR5B21A6NL26 309 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF705EA8MWA4 302 aaPredicted RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 J3KT08 172 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SAP18O00422 153 aaKnown RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 HSD17B6O14756 317 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RGS16O15492 202 aaPredicted RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SEMA4FO95754 770 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 AIFM1O95831 613 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 CD8AP01732 235 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 HBE1P02100 147 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 NMBP08949 121 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 GZMBP10144 247 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ACP2P11117 423 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 PVRP15151 417 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF19P17023 458 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 CHRNB2P17787 502 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RPS3P23396 243 aaKnown RBP eCLIP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ATP6V0CP27449 155 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SRIP30626 198 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 GABRA3P34903 492 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 REG1BP48304 166 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 GNG4P50150 75 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 PDX1P52945 283 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 CTBP2P56545 445 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 S100A10P60903 97 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RPS25P62851 125 aaKnown RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 MRPS6P82932 125 aaKnown RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 TNFAIP6P98066 277 aaPredicted RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 HSD52Q0P140 79 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RGNQ15493 299 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 IZUMO4Q1ZYL8 232 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 NXNL2Q5VZ03 156 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 HBMQ6B0K9 141 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ALKAL1Q6UXT8 129 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 NEGR1Q7Z3B1 354 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 HIST3H2BBQ8N257 126 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 PGBD5Q8N414 524 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SPICQ8N5J4 248 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF740Q8NDX6 193 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF519Q8TB69 540 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 FBXO25Q8TCJ0 367 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 GPR148Q8TDV2 347 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 SSMEM1Q8WWF3 244 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 RND1Q92730 232 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 MAGOHBQ96A72 148 aaKnown RBP3.78□□□□□ -1.8
NIPBL-206ENST00000509429 CLDN23Q96B33 292 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 WDYHV1Q96HA8 205 aa3.78□□□□□ -1.8
NIPBL-206ENST00000509429 LINC00477Q96M19 166 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms