RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 PSMB3P49720 205 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 RPS15AP62244 130 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 Q0VG73 95 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MEX3BQ6ZN04 569 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MUC15Q8N387 334 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 ZIC4Q8N9L1 334 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 OR52L2PQ8NGH6 319 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 UHRF2Q96PU4 802 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 OR6C1Q96RD1 312 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 GPER1Q99527 375 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 RSG1Q9BU20 258 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MTIF3Q9H2K0 278 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 LYRM4Q9HD34 91 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 COA3Q9Y2R0 106 aaPredicted RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MLNRO43193 412 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 NPIPB7O75200 414 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF253O75346 499 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM50AO95807 157 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 GPX1P07203 203 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 MSR1P21757 451 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 FXYD4P59646 89 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 Q5PR19 223 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 RAET1LQ5VY80 246 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 KLHL24Q6TFL4 600 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TCF23Q7RTU1 214 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 BAGE3Q86Y29 109 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 BAGE2Q86Y30 109 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 LINC00346Q8IVM7 164 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 SCGB1C1Q8TD33 95 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 CYB5D2Q8WUJ1 264 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 RBM24Q9BX46 236 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TM2D1Q9BX74 207 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 CENPMQ9NSP4 180 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM131Q92545 1883 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 COL4A6Q14031 1691 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 LAMA2P24043 3122 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 SH2D1BO14796 132 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 GALR2O43603 387 aaPredicted RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 NRASP01111 189 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 KRASP01116 189 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 CTSEP14091 401 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 EN2P19622 333 aaPredicted RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 ARG2P78540 354 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 RBPJQ06330 500 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 CXorf66Q5JRM2 361 aaPredicted RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 FAM57BQ71RH2 274 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4C3Q8NH37 302 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 RNF133Q8WVZ7 376 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 TXNIPQ9H3M7 391 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 PTRH2Q9Y3E5 179 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF850A8MQ14 1090 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 RAMP3O60896 148 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 TNFSF15O95150 251 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 GLB1P16278 677 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF10P21506 573 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SERF2P84101 59 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 ID3Q02535 119 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 ZP4Q12836 540 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SPIN3Q5JUX0 258 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 CDCP2Q5VXM1 449 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 OR11L1Q8NGX0 322 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 LHX4Q969G2 390 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SIGLEC12Q96PQ1 595 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 FAM60AQ9NP50 221 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 HCFC2Q9Y5Z7 792 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SPACA6W5XKT8 324 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 IGLON5A6NGN9 336 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 B4DGG1 531 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SLC33A1O00400 549 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 TAX1BP3O14907 124 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 GNRHRP30968 328 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 FMODQ06828 376 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM215Q68D42 235 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 FAM71F2Q6NXP2 309 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 ADAMTSL4Q6UY14 1074 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 DGAT2L6Q6ZPD8 337 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4F17Q8NGA8 305 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 OR51E1Q8TCB6 317 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 SSC4DQ8WTU2 575 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 VSTM2LQ96N03 204 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4F4Q96R69 305 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 HDHD3Q9BSH5 251 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 FAM103A1Q9BTL3 118 aaKnown RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 APOOQ9BUR5 198 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 IL21Q9HBE4 155 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 NRN1Q9NPD7 142 aa8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
PDGFRA-207ENST00000509092 GAGE12BA1L429 117 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TRAF3IP2O43734 574 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 PIAS2O75928 621 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 IGHMP01871 453 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 UCP1P25874 307 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF133P52736 654 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms