RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 RAB3CQ96E17 227 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF714Q96N38 554 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTPN20-220ENST00000508715 TAS2R3Q9NYW6 316 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 COMMD3Q9UBI1 195 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 LPAR3Q9UBY5 353 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF69Q9UC07 566 aa8.44□□□□□ -1.06
PTPN20-220ENST00000508715 RSL24D1Q9UHA3 163 aaKnown RBP8.44□□□□□ -1.06
PTPN20-220ENST00000508715 A0A075B6Q4 140 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 IGKV1D-8A0A087WSZ0 117 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 TRGV10A0A0A0MS01 117 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 TRBV6-6A0A0A6YYG2 114 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 KBTBD11-OT1A0A1B0GTJ5 212 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 FUOMA2VDF0 154 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 METTL21EPA6NDL7 271 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 A6NHS1 94 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF729A6NN14 1252 aaPredicted RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 C12orf77C9JDV5 145 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF701M0R085 212 aaPredicted RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 SSX5O60225 188 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 HPGDSO60760 199 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 CA11O75493 328 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 RBP4P02753 201 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 ELK1P19419 428 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 CDK2P24941 298 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 GLP1RP43220 463 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 DYNC1I2Q13409 638 aaKnown RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 CDNFQ49AH0 187 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 UBE2NLQ5JXB2 153 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 HEPN1Q6WQI6 88 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 BRD3OSQ6XYD6 125 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 IZUMO1Q8IYV9 350 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 OR1L1Q8NH94 360 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 LHX4Q969G2 390 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 KIRREL1Q96J84 757 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 OCEL1Q9H607 264 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 METTL8Q9H825 291 aaKnown RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 CALYQ9NYX4 217 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 OR6C3Q9NZP0 311 aa8.43□□□□□ -1.06
PTPN20-220ENST00000508715 CCDC59Q9P031 241 aaKnown RBP8.43□□□□□ -1.06
PTPN20-220ENST00000508715 IGHV1-69DA0A0B4J2H0 117 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 SMIM31A0A1B0GVY4 71 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 A0A1W2PRD5 423 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 A0A1W2PRF3 423 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 A0A1W2PRM7 423 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 FAM172BPA6NC97 362 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 TMEM235A6NFC5 223 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 ORC5O43913 435 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 CLPXO76031 633 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 IGHV1-69P01742 117 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 RANBP1P43487 201 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 LOXL3P58215 753 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 HMGN3Q15651 99 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 TRAPPC6BQ86SZ2 158 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 NANPQ8TBE9 248 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF286AQ9HBT8 521 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 Q9N2K0 584 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 ZNRD1Q9P1U0 126 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF230Q9UIE0 474 aaPredicted RBP8.42□□□□□ -1.06
PTPN20-220ENST00000508715 CDC42EP3Q9UKI2 254 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 SESN1Q9Y6P5 492 aa8.42□□□□□ -1.06
PTPN20-220ENST00000508715 TRAV18A0A075B6X5 111 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 A0A087X0M5 115 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 IGKV1-6A0A0C4DH72 117 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 A0A1B0GX30 115 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 CCDC160A6NGH7 325 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 H3BUI4 141 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 F2RL2O00254 374 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 XRCC3O43542 346 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 HBZP02008 142 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 APOA1P02647 267 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 MELTFP08582 738 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 GZMHP20718 246 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 PAX6P26367 422 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 CD34P28906 385 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 MADCAM1Q13477 382 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 HERPUD1Q15011 391 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 CHRFAM7AQ494W8 412 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 LAX1Q8IWV1 398 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 DYNAPQ8N1N2 210 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 ZNF565Q8N9K5 539 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 NUDCD2Q8WVJ2 157 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 ACOT12Q8WYK0 555 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 MAFIPQ8WZ33 124 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 GCDHQ92947 438 aaPredicted RBP8.41□□□□□ -1.06
PTPN20-220ENST00000508715 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 ARL11Q969Q4 196 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 DGCR14Q96DF8 476 aaKnown RBP8.41□□□□□ -1.06
PTPN20-220ENST00000508715 CMTM3Q96MX0 182 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 CMSS1Q9BQ75 279 aaKnown RBP8.41□□□□□ -1.06
PTPN20-220ENST00000508715 DCUN1D5Q9BTE7 237 aa8.41□□□□□ -1.06
PTPN20-220ENST00000508715 SUCNR1Q9BXA5 334 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms