RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ATOH8Q96SQ7 321 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RTN4RQ9BZR6 473 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 CHRNA10Q9GZZ6 450 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC25A22Q9H936 323 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RHOFQ9HBH0 211 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 GPR84Q9NQS5 396 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SPANXB1Q9NS25 103 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 MTCH1Q9NZJ7 389 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RAB22AQ9UL26 194 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 HSPB11Q9Y547 144 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 DNAJC15Q9Y5T4 150 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MUC4Q99102 2169 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MFSD2BA6NFX1 497 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 NPIPB8E9PQR5 432 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 HMGN4O00479 90 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GSTZ1O43708 216 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 HLA-AP01891 365 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 THY1P04216 161 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 THBS1P07996 1170 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CPN1P15169 458 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LOXP28300 417 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 FUT6P51993 359 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CCL8P80075 99 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 AQP6Q13520 282 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF266Q14584 549 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PDCD1Q15116 288 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 C19orf35Q6ZS72 473 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MYPOPQ86VE0 399 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 CALHM3Q86XJ0 350 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 KLHDC8BQ8IXV7 354 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 SUMF2Q8NBJ7 301 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RPS4Y2Q8TD47 263 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ITLN2Q8WWU7 325 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 YIPF5Q969M3 257 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 P2RX4Q99571 388 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MAGT1Q9H0U3 335 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF665Q9H7R5 613 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 BABAM2Q9NXR7 383 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 CEPT1Q9Y6K0 416 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 J3KTA2 159 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LANCL1O43813 399 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 NXPH3O95157 252 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 LY6G6DO95868 133 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 H2AFB1P0C5Y9 115 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RAB6AP20340 208 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PTBP1P26599 531 aaKnown RBP eCLIP2.56□□□□□ -2
NEDD4-208ENST00000508342 SELENOPP49908 381 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 EFNA4P52798 201 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 EMC4Q5J8M3 183 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZDHHC24Q6UX98 284 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MBOAT2Q6ZWT7 520 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GTSCR1Q86UQ5 136 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TMEM99Q8N816 258 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR51A4Q8NGJ6 313 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 NEIL1Q96FI4 390 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF479Q96JC4 524 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 EGLN2Q96KS0 407 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR2M2Q96R28 347 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 C2orf88Q9BSF0 95 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ST3GAL6Q9Y274 331 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 NTNG1Q9Y2I2 539 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TM4SF5O14894 197 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 SYNGR3O43761 229 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 SPI1P17947 270 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 IGHV1-2P23083 117 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GABRB3P28472 473 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MAS1LP35410 378 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PTGFRP43088 359 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 MEOX2P50222 304 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RPL31P62899 125 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 ETFDHQ16134 617 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 PABPC1L2AQ5JQF8 200 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 DMRTA1Q5VZB9 504 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OR6M1Q8NGM8 313 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ZNF519Q8TB69 540 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 DUX5Q96PT3 197 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 VGLL1Q99990 258 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GSX2Q9BZM3 304 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 BANF2Q9H503 90 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 TMEM160Q9NX00 188 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MRPS18CQ9Y3D5 142 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 DYSFO75923 2080 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 IGKV1-8A0A0C4DH67 115 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 INAFM1C9JVW0 142 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 SDHDO14521 159 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RAMP1O60894 148 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 GCGP01275 180 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 MDH2P40926 338 aaKnown RBP2.56□□□□□ -2
NEDD4-208ENST00000508342 CRYBB2P43320 205 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 ADORA2A-AS1P86434 159 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 RAB40BQ12829 278 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 FOXF2Q12947 444 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 IL24Q13007 206 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 C19orf54Q5BKX5 351 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 DMRTC1Q5HYR2 192 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 OLIG3Q7RTU3 272 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 UBE3DQ7Z6J8 389 aa2.56□□□□□ -2
NEDD4-208ENST00000508342 BEND2Q8NDZ0 799 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms