RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF184Q99676 751 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-203ENST00000507004 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A10PA6NDY2 464 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A7PA6NKC0 464 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 FAM90A23PA8MXZ1 464 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 PIN1P1O15428 100 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 TXNL1O43396 289 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 CDRT1O95170 752 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 AMY1AP04745 511 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 AMY2AP04746 511 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 GLAP06280 429 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 SNRNP70P08621 437 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 SERPINA2P20848 420 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 LOXL3P58215 753 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 HES1Q14469 280 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 C9orf152Q5JTZ5 239 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 ATAD3CQ5T2N8 411 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 C6orf183Q5T699 404 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 XAF1Q6GPH4 301 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 FOXRED2Q8IWF2 684 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 NKAIN3Q8N8D7 197 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 OR56B4Q8NH76 319 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 NEK7Q8TDX7 302 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 CYGBQ8WWM9 190 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 MYDGFQ969H8 173 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 GON7Q9BXV9 100 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 ZFP57Q9NU63 452 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 GHRLQ9UBU3 117 aa11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 ZMAT5Q9UDW3 170 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-203ENST00000507004 HSD17B6O14756 317 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 SSTR5P35346 364 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 EBI3Q14213 229 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 SLC22A6Q4U2R8 563 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 STEAP3Q658P3 488 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 ZNF554Q86TJ5 538 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 IZUMO1Q8IYV9 350 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 C8orf59Q8N0T1 100 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 DRAM1Q8N682 238 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 OR8H1Q8NGG4 311 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 RFESDQ8TAC1 157 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 ARL11Q969Q4 196 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 PHF21AQ96BD5 680 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 VCXQ9H320 206 aa11.47□□□□□ -0.57
HMGCS1-203ENST00000507004 A0A1W2PRX2 142 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 AIPO00170 330 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 SDCBPO00560 298 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 MYL12BO14950 172 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 SPINT2O43291 252 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 MT-ND4P03905 459 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 GNG10P50151 68 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 ADARB1P78563 741 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 ST3GAL4Q11206 333 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 DOC2BQ14184 412 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 LTC4SQ16873 150 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 KHDC1LQ5JSQ8 128 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 ZNF497Q6ZNH5 498 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 JAGN1Q8N5M9 183 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 C5orf56Q8N8D9 126 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 OR2T10Q8NGZ9 312 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 DPF1Q92782 380 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 PGLYRP3Q96LB9 341 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 UQCC2Q9BRT2 126 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 PLCXD1Q9NUJ7 323 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 GFOD1Q9NXC2 390 aa11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 SIRT4Q9Y6E7 314 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-203ENST00000507004 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 SERPINE3A8MV23 424 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 IGHG2P01859 326 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 CD1BP29016 333 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 WNT4P56705 351 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 DCTN2Q13561 401 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 TCTEX1D4Q5JR98 221 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 HIST2H2BDQ6DRA6 164 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 TGIF2LXQ8IUE1 241 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 GGHQ92820 318 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 CLEC2DQ9UHP7 191 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 TRAPPC2LQ9UL33 140 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 ERGIC3Q9Y282 383 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 LRRC42Q9Y546 428 aa11.45□□□□□ -0.58
HMGCS1-203ENST00000507004 TGP01266 2768 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 AP4M1O00189 453 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 RRP9O43818 475 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 LALBAP00709 142 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 UBBP0CG47 229 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms