RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 C9orf152Q5JTZ5 239 aa11.42□□□□□ -0.58
CDC42SE2-209ENST00000506419 ATAD3CQ5T2N8 411 aa11.42□□□□□ -0.58
CDC42SE2-209ENST00000506419 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
CDC42SE2-209ENST00000506419 CHCHD3Q9NX63 227 aaKnown RBP11.42□□□□□ -0.58
CDC42SE2-209ENST00000506419 PSORS1C1Q9UIG5 152 aa11.42□□□□□ -0.58
CDC42SE2-209ENST00000506419 PNMA8CA0A1B0GUJ8 204 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 IGLL1P15814 213 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 LOXL3P58215 753 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 MADCAM1Q13477 382 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 YIF1BQ5BJH7 314 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 GLIPR1L1Q6UWM5 242 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 ZNF497Q6ZNH5 498 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 SETD9Q8NE22 299 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 FBLIM1Q8WUP2 373 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 ARL11Q969Q4 196 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 MUL1Q969V5 352 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 RBMXL1Q96E39 390 aaKnown RBP11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 OR14A2Q96R54 314 aa11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 AMMECR1Q9Y4X0 333 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE2-209ENST00000506419 EFCAB10A6NFE3 127 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 M0QZK8 103 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 ZNF780AO75290 641 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 GTF2F2P13984 249 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 CAPGP40121 348 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 VHLP40337 213 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 REG1BP48304 166 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 RAB7AP51149 207 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 EBI3Q14213 229 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 RCN1Q15293 331 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 MPV17LQ2QL34 196 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 C5orf24Q7Z6I8 188 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 LINC00596Q86U02 117 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 ZNF329Q86UD4 541 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 OR10X1Q8NGY0 326 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 PHF21AQ96BD5 680 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 S100A13Q99584 98 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 C8orf4Q9NR00 106 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 PCDHB16Q9NRJ7 776 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 PLCXD1Q9NUJ7 323 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 MRPS28Q9Y2Q9 187 aaKnown RBP11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 MOB4Q9Y3A3 225 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 HSPE1-MOB4S4R3N1 261 aa11.4□□□□□ -0.58
CDC42SE2-209ENST00000506419 IGHV3-43A0A0B4J1X8 118 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 IGHV3-72A0A0B4J1Y9 119 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 SLC31A2O15432 143 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 ORC5O43913 435 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 IGKV1D-33P01593 117 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 IGKV1-33P01594 117 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 MAS1P04201 325 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 IGHV3-43DP0DP04 118 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 TMEM11P17152 192 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 FSTP19883 344 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 ZNF134P52741 427 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 HES1Q14469 280 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 OR8H3Q8N146 312 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 JAGN1Q8N5M9 183 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 LINC00311Q8N616 119 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 NANOGP1Q8N7R0 232 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 TMEM104Q8NE00 496 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 BPIFB6Q8NFQ5 453 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 OR52M1Q8NGK5 317 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 SGCDQ92629 289 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 DERL3Q96Q80 235 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 BANF2Q9H503 90 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 AURKAIP1Q9NWT8 199 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 RCC2Q9P258 522 aaKnown RBP11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 LINC00527Q9UJ94 153 aa11.39□□□□□ -0.59
CDC42SE2-209ENST00000506419 IGHV1-3A0A0C4DH29 117 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 ZNF736B4DX44 427 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 CCRL2O00421 344 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 CASQ2O14958 399 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 CD1AP06126 327 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 CELP19835 753 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 CD33P20138 364 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 MED21Q13503 144 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 GPR176Q14439 515 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 INSL4Q14641 139 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 SYT6Q5T7P8 510 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 SIGIRRQ6IA17 410 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
CDC42SE2-209ENST00000506419 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms