RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	C9orf152	Q5JTZ5	239 aa		13.74	□□□□□ -0.21
OTUD4-206	ENST00000505976	TTC23	Q5W5X9	447 aa		13.74	□□□□□ -0.21
OTUD4-206	ENST00000505976	SGCD	Q92629	289 aa		13.74	□□□□□ -0.21
OTUD4-206	ENST00000505976	TMEM80	Q96HE8	168 aa		13.74	□□□□□ -0.21
OTUD4-206	ENST00000505976	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.74	□□□□□ -0.21
OTUD4-206	ENST00000505976	TRBV5-7	A0A0A0MS05	114 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	TMEM30CP	A0ZSE6	113 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	PIN1P1	O15428	100 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	FGF16	O43320	207 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	ZNF780A	O75290	641 aa	Predicted RBP	13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	TMEM11	P17152	192 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	LRRC36	Q1X8D7	754 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	YIF1B	Q5BJH7	314 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	ZNF497	Q6ZNH5	498 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	LINC00311	Q8N616	119 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	ZFP41	Q8N8Y5	198 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	SETD9	Q8NE22	299 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	OR52M1	Q8NGK5	317 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	MRAP	Q8TCY5	172 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	CYGB	Q8WWM9	190 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	GGH	Q92820	318 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976	S100A13	Q99584	98 aa		13.73	□□□□□ -0.21
OTUD4-206	ENST00000505976		A0A1W2PPE3	182 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	PSMB11	A5LHX3	300 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	HSD17B6	O14756	317 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	IGKV1D-33	P01593	117 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	IGKV1-33	P01594	117 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	PF4	P02776	101 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	GTF2F2	P13984	249 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	LOXL3	P58215	753 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	MED21	Q13503	144 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	EBI3	Q14213	229 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	HES1	Q14469	280 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	SLC22A6	Q4U2R8	563 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	LAIR2	Q6ISS4	152 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	DHRSX	Q8N5I4	330 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	PACRGL	Q8N7B6	248 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	OR10X1	Q8NGY0	326 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	ARL11	Q969Q4	196 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	C8orf4	Q9NR00	106 aa		13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	RCC2	Q9P258	522 aa	Known RBP	13.72	□□□□□ -0.21
OTUD4-206	ENST00000505976	ORC5	O43913	435 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	MT-ND4	P03905	459 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	ST3GAL4	Q11206	333 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	GPR176	Q14439	515 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	ATAD3C	Q5T2N8	411 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	LYPD6	Q86Y78	171 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	C8orf31	Q8N9H6	132 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	UBALD1	Q8TB05	177 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	ST6GALNAC6	Q969X2	333 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	OR14A2	Q96R54	314 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	CHCHD3	Q9NX63	227 aa	Known RBP	13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	GFOD1	Q9NXC2	390 aa		13.71	□□□□□ -0.21
OTUD4-206	ENST00000505976	IGHV1-3	A0A0C4DH29	117 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	SDCBP	O00560	298 aa	Predicted RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	IGHG2	P01859	326 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	GAPDH	P04406	335 aa	Known RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	SLC35A2	P78381	396 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	DOC2B	Q14184	412 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	HNF4G	Q14541	408 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	KHDC1L	Q5JSQ8	128 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	ETV3L	Q6ZN32	361 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	ZNF329	Q86UD4	541 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	IZUMO1	Q8IYV9	350 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976		Q8N6K4	173 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	CHPT1	Q8WUD6	406 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	CCDC107	Q8WV48	283 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	MUL1	Q969V5	352 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	MRPS24	Q96EL2	167 aa	Known RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	RCC1L	Q96I51	464 aa	Known RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	NOL4L	Q96MY1	436 aa	Predicted RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	CNOT2	Q9NZN8	540 aa	Known RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	CKLF	Q9UBR5	152 aa		13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.7	□□□□□ -0.22
OTUD4-206	ENST00000505976	IGHV3-43	A0A0B4J1X8	118 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	AIP	O00170	330 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	CCRL2	O00421	344 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	CD1A	P06126	327 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	IGHV3-43D	P0DP04	118 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	REG1B	P48304	166 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	TAS2R43	P59537	309 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976		Q3ZCU0	254 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	GLIPR1L1	Q6UWM5	242 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	CDH26	Q8IXH8	852 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	GAPT	Q8N292	157 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	LINC00482	Q8N8I6	264 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	TMEM104	Q8NE00	496 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	FBLIM1	Q8WUP2	373 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	EAF1	Q96JC9	268 aa	Predicted RBP	13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	DERL3	Q96Q80	235 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	SPACA1	Q9HBV2	294 aa		13.69	□□□□□ -0.22
OTUD4-206	ENST00000505976	IGHV3-72	A0A0B4J1Y9	119 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	PNMA8C	A0A1B0GUJ8	204 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976		A0A1W2PPK0	400 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	EFCAB10	A6NFE3	127 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	GNAO1	P09471	354 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	RPL23A	P62750	156 aa	Known RBP	13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	RCN1	Q15293	331 aa		13.68	□□□□□ -0.22
OTUD4-206	ENST00000505976	MOB3B	Q86TA1	216 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms