RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 SHOXO15266 292 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ST8SIA3O43173 380 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 PHF1O43189 567 aaPredicted RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 JTBO76095 146 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 HAND1O96004 215 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 GLI4P10075 376 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 VDAC1P21796 283 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 P2RY1P47900 373 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 TDGF1P3P51864 188 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 LUMP51884 338 aaPredicted RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 P2RX3P56373 397 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 SELENOVP59797 346 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ERVS71-1P61550 626 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 NKX6-1P78426 367 aaPredicted RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ATXN7L3Q14CW9 347 aaPredicted RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 AANATQ16613 207 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ALKBH6Q3KRA9 238 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 PHLDA2Q53GA4 152 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ACP7Q6ZNF0 438 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 C11orf53Q8IXP5 236 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 PPP1R35Q8TAP8 253 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ERGIC1Q969X5 290 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 MRPL24Q96A35 216 aaKnown RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ABHD17AQ96GS6 310 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF488Q96MN9 340 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 GSKIPQ9P0R6 139 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 IL36RNQ9UBH0 155 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 TINAGQ9UJW2 476 aa8.29□□□□□ -1.08
COL1A1-210ENST00000504289 UBE2J1Q9Y385 318 aaPredicted RBP8.29□□□□□ -1.08
COL1A1-210ENST00000504289 CHD8Q9HCK8 2581 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 MFSD2BA6NFX1 497 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 OOEPA6NGQ2 149 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RNF212BA8MTL3 300 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 MPTX1A8MV57 137 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 A8MXK9 166 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 K7EPK0 472 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 FGF16O43320 207 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 HEXAP06865 529 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 GRPP07492 148 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 F2RP25116 425 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RPL12P30050 165 aaKnown RBP8.28□□□□□ -1.08
COL1A1-210ENST00000504289 GATA4P43694 442 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 KLF3P57682 345 aaPredicted RBP8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RBPJQ06330 500 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 GNMTQ14749 295 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 TBR1Q16650 682 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 WDR82Q6UXN9 313 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 TBC1D26Q86UD7 250 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 CCDC28AQ8IWP9 274 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 NUP37Q8NFH4 326 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 OR10V1Q8NGI7 309 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 SECTM1Q8WVN6 248 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 S100PBPQ96BU1 408 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 SAT2Q96F10 170 aaPredicted RBP8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RRNAD1Q96FB5 475 aaKnown RBP8.28□□□□□ -1.08
COL1A1-210ENST00000504289 LURAP1Q96LR2 239 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 REG4Q9BYZ8 158 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 RAB9BQ9NP90 201 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 SDHAF2Q9NX18 166 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 OR5AC2Q9NZP5 309 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 TRAPPC2LQ9UL33 140 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 USP24Q9UPU5 2620 aa8.28□□□□□ -1.08
COL1A1-210ENST00000504289 ESPL1Q14674 2120 aa8.27□□□□□ -1.08
COL1A1-210ENST00000504289 A0A1B0GU03 582 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 RAB19A4D1S5 217 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 H0YL77 283 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 SIRPB1O00241 398 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 ZNHIT1O43257 154 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 GPR137BO60478 399 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 PGLYRP1O75594 196 aaPredicted RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 MBPP02686 304 aaPredicted RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 FGF2P09038 288 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 HKR1P10072 659 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 RCC1P18754 421 aaPredicted RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 FABP6P51161 128 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 S100A10P60903 97 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 FOXC1Q12948 553 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 TMEM268Q5VZI3 342 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 UQCC3Q6UW78 93 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 C20orf204Q6ZNR8 217 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 Q6ZR03 302 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF818PQ6ZRF7 136 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 LYZL2Q7Z4W2 148 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 DOLPP1Q86YN1 238 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 SELENOHQ8IZQ5 122 aaKnown RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 STPG2Q8N412 459 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 UBAC2Q8NBM4 344 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 PLPPR1Q8TBJ4 325 aa8.27□□□□□ -1.09
COL1A1-210ENST00000504289 LSM10Q969L4 123 aaKnown RBP8.27□□□□□ -1.09
COL1A1-210ENST00000504289 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms