RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ZNF626Q68DY1 528 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 HEPN1Q6WQI6 88 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 NUDT8Q8WV74 236 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 PP6455Q8WZ26 134 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SHISA4Q96DD7 197 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 RBMXL1Q96E39 390 aaKnown RBP5.48□□□□□ -1.53
CLCN3-204ENST00000504131 TEX37Q96LM6 180 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 TNFRSF13CQ96RJ3 184 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SLC17A9Q9BYT1 436 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 RNF39Q9H2S5 420 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 CALHM2Q9HA72 323 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SLC39A9Q9NUM3 307 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 MMP17Q9ULZ9 603 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 KLF12Q9Y4X4 402 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 ENPP4Q9Y6X5 453 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 TRAV8-4A0A0B4J246 113 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 MMP23AO75900 390 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 MOSP00540 346 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 GAPDHP04406 335 aaKnown RBP5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SBK3P0C264 359 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 MPZP25189 248 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 CCKBRP32239 447 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 PSMB2P49721 201 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF133P52736 654 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SEC11AP67812 179 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 SAMD5Q5TGI4 173 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 PWWP2BQ6NUJ5 590 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 FAM231DQ6ZW35 169 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 FAM214BQ7L5A3 538 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 TBC1D26Q86UD7 250 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 CFHR4Q92496 578 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 ISL2Q96A47 359 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 BORCS8Q96FH0 119 aa5.48□□□□□ -1.53
CLCN3-204ENST00000504131 MYH15Q9Y2K3 1946 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CDHR4A6H8M9 788 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 HHLA1C9JL84 531 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 C3orf56Q8N813 242 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MRPL24Q96A35 216 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 DNAJC30Q96LL9 226 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MRPL20Q9BYC9 149 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 PARP11Q9NR21 331 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CACFD1Q9UGQ2 172 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 TMED7Q9Y3B3 224 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 A0A1B0GTI1 187 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CD5LO43866 347 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 FGF3P11487 239 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CSN1S1P47710 185 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CCL23P55773 120 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 RPL31P62899 125 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 OR4C16Q8NGL9 310 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 GPX7Q96SL4 187 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 WDR13Q9H1Z4 485 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MRPS16Q9Y3D3 137 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 TRAV8-1A0A0A6YYK1 113 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 RBFOX3A6NFN3 312 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CPSF4LA6NMK7 179 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 GPR75O95800 540 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 CD160O95971 181 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 HOXB9P17482 250 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 AQP1P29972 269 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MVDP53602 400 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 EGR4Q05215 589 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MFSD12Q6NUT3 480 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 H2BFWTQ7Z2G1 175 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 VN1R2Q8NFZ6 395 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 OR51G1Q8NGK1 321 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 OR13A1Q8NGR1 328 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 ZNF488Q96MN9 340 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 SSBP3Q9BWW4 388 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 C5P01031 1676 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 COL1A1P02452 1464 aaPredicted RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 hADV38S2A0JD32 116 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 C7orf66A4D0T2 115 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 GABARAPH6UMI1 98 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 FAHP16930 419 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 TSPOP30536 169 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 DGCR2P98153 550 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 HHEXQ03014 270 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 DHRS2Q13268 280 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 UTF1Q5T230 341 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 LEG1Q6P5S2 330 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 FBXW12Q6X9E4 464 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 OR10G7Q8NGN6 311 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 HILPDAQ9Y5L2 63 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MRPS18BQ9Y676 258 aaKnown RBP5.47□□□□□ -1.53
CLCN3-204ENST00000504131 MYH7P12883 1935 aa5.47□□□□□ -1.53
CLCN3-204ENST00000504131 TMEM213A2RRL7 107 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 CDC14CA4D256 554 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 NME4O00746 187 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 PPP1CCP36873 323 aaKnown RBP5.46□□□□□ -1.53
CLCN3-204ENST00000504131 MEOX1P50221 254 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 HTR6P50406 440 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 ISL1P61371 349 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 HBG2P69892 147 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 BTG2P78543 158 aa5.46□□□□□ -1.53
CLCN3-204ENST00000504131 WDR25Q64LD2 544 aaPredicted RBP5.46□□□□□ -1.53
CLCN3-204ENST00000504131 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms