RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 Q6P435 159 aa12.62□□□□□ -0.39
DDR1-250ENST00000503628 OR8H2Q8N162 312 aa12.62□□□□□ -0.39
DDR1-250ENST00000503628 OSR2Q8N2R0 312 aa12.62□□□□□ -0.39
DDR1-250ENST00000503628 CHST4Q8NCG5 386 aa12.62□□□□□ -0.39
DDR1-250ENST00000503628 DPF1Q92782 380 aa12.62□□□□□ -0.39
DDR1-250ENST00000503628 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
DDR1-250ENST00000503628 DYNC2H1Q8NCM8 4307 aaKnown RBP12.62□□□□□ -0.39
DDR1-250ENST00000503628 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
DDR1-250ENST00000503628 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 DEGS1O15121 323 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 PSPNO60542 156 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 GTF2F2P13984 249 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 ZNF44P15621 663 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 MYL9P24844 172 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 LMO1P25800 156 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 FGF9P31371 208 aaPredicted RBP12.61□□□□□ -0.39
DDR1-250ENST00000503628 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
DDR1-250ENST00000503628 SCN1BQ07699 218 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 ZNF273Q14593 569 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 GFI1Q99684 422 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 CHST6Q9GZX3 395 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 TXNL4BQ9NX01 149 aaKnown RBP12.61□□□□□ -0.39
DDR1-250ENST00000503628 GHRLQ9UBU3 117 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 SSR3Q9UNL2 185 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 ST3GAL6Q9Y274 331 aa12.61□□□□□ -0.39
DDR1-250ENST00000503628 AK6Q9Y3D8 172 aaKnown RBP12.61□□□□□ -0.39
DDR1-250ENST00000503628 A0A1W2PP11 408 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
DDR1-250ENST00000503628 SLC22A1O15245 554 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 UBBP0CG47 229 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 CD36P16671 472 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 HTR2CP28335 458 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 OR3A1P47881 315 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 DYNLT3P51808 116 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 DCTN2Q13561 401 aaKnown RBP12.6□□□□□ -0.39
DDR1-250ENST00000503628 GRK1Q15835 563 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 LINC00596Q86U02 117 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 OR6M1Q8NGM8 313 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 MRPS24Q96EL2 167 aaKnown RBP12.6□□□□□ -0.39
DDR1-250ENST00000503628 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 OR51E2Q9H255 320 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 RYR2Q92736 4967 aa12.6□□□□□ -0.39
DDR1-250ENST00000503628 STAB2Q8WWQ8 2551 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 SHISA3A0PJX4 238 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 SLC17A2O00624 439 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 PDCD5O14737 125 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 MGST3O14880 152 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 SMIM18P0DKX4 95 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 GADD45AP24522 165 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 PSMD7P51665 324 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 EDDM3BP56851 147 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 C10orf99Q6UWK7 81 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
DDR1-250ENST00000503628 IFT22Q9H7X7 185 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 PLGRKTQ9HBL7 147 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 HILPDAQ9Y5L2 63 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 V9GY05 133 aa12.59□□□□□ -0.39
DDR1-250ENST00000503628 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 C17orf98A8MV24 154 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 GEMIN2O14893 280 aaKnown RBP12.58□□□□□ -0.4
DDR1-250ENST00000503628 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
DDR1-250ENST00000503628 CSN2P05814 226 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 MGMTP16455 207 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 DLX6P56179 175 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 EDDM3AQ14507 147 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 MPV17LQ2QL34 196 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 TMEM104Q8NE00 496 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 OR13D1Q8NGV5 346 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 CHCHD6Q9BRQ6 235 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 CST11Q9H112 138 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 BANF2Q9H503 90 aa12.58□□□□□ -0.4
DDR1-250ENST00000503628 BIRC6Q9NR09 4857 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 BPNT1O95861 308 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 RAB3BP20337 219 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 ERP29P30040 261 aaKnown RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 RANBP1P43487 201 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 P2RX3P56373 397 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 MEF2CQ06413 473 aaPredicted RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 RAB11BQ15907 218 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 OR4X2Q8NGF9 303 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 FAM46BQ96A09 425 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 YIPF6Q96EC8 236 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 Q96M66 194 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
DDR1-250ENST00000503628 SELENOIQ9C0D9 397 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 ZNF581Q9P0T4 197 aa12.57□□□□□ -0.4
DDR1-250ENST00000503628 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms