RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CDKN3Q16667 212 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 POM121L1PQ3SYA9 428 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 CLEC12AQ5QGZ9 265 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SPATA31B1PQ5VZV4 182 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 GJB7Q6PEY0 223 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 OPN5Q6U736 354 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 CALHM3Q86XJ0 350 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 UMODL1-AS1Q8N2C9 162 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF709Q8N972 641 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 TMEM116Q8NCL8 245 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 ADAD2Q8NCV1 583 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 OR8G5Q8NG78 346 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 OR1L4Q8NGR5 311 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 FLYWCH2Q96CP2 140 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 ADTRPQ96IZ2 230 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 ZBTB45Q96K62 511 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SRSF8Q9BRL6 282 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 SCRT1Q9BWW7 348 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 NPFFR1Q9GZQ6 430 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 PLAC1Q9HBJ0 212 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 ABRACLQ9P1F3 81 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 V9GYY9 64 aa5.64□□□□□ -1.51
CLCN3-203ENST00000502998 HELZP42694 1942 aaKnown RBP5.64□□□□□ -1.51
CLCN3-203ENST00000502998 CACNA1EQ15878 2313 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TRBV4-1A0A0J9YWV2 114 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 CENPVL1A0A0U1RR11 272 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 A0A1B0GX51 115 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ODAMA1E959 279 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SLC38A8A6NNN8 435 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 E9PLN8 166 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 F5H5K5 113 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TBX6O95947 436 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 CGAP01215 116 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 VIPP01282 170 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 EIF4EP06730 217 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 PRSS56P0CW18 603 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 CXCL8P10145 99 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ARSAP15289 507 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 HIST1H1DP16402 221 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TNFSF9P41273 254 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 LPAR6P43657 344 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 P2RY1P47900 373 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 LHX2P50458 406 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 DAP3P51398 398 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 DLX6P56179 175 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TIRAPP58753 221 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 RAB10P61026 200 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 LCN6P62502 163 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ROM1Q03395 351 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ADIRFQ15847 76 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF77Q15935 545 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 NKG7Q16617 165 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 MS4A18Q3C1V0 323 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SFRP4Q6FHJ7 346 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF343Q6P1L6 599 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SBSNQ6UWP8 590 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 PLXDC2Q6UX71 529 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SIGLEC15Q6ZMC9 328 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF595Q8IYB9 648 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 PAQR4Q8N4S7 273 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF485Q8NCK3 441 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF548Q8NEK5 533 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 OR4K17Q8NGC6 315 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 OR4A16Q8NH70 328 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 PROKR1Q8TCW9 393 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 NEU4Q8WWR8 484 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 FCAMRQ8WWV6 532 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 GEMIN6Q8WXD5 167 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 PIGCQ92535 297 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ST6GALNAC6Q969X2 333 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SMIM19Q96E16 107 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SCARF2Q96GP6 870 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 AP1S3Q96PC3 154 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 DUX3Q96PT4 197 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 KXD1Q9BQD3 176 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ABHD6Q9BV23 337 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 GPR174Q9BXC1 333 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 DUSP16Q9BY84 665 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SAMD10Q9BYL1 202 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 FOXQ1Q9C009 403 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 WDR61Q9GZS3 305 aaKnown RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TMEM133Q9H2Q1 129 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF703Q9H7S9 590 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-203ENST00000502998 CYTL1Q9NRR1 136 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 GPATCH2Q9NW75 528 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 FAM206AQ9NX38 181 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 IL36AQ9UHA7 158 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SIT1Q9Y3P8 196 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 SNX11Q9Y5W9 270 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 NOTCH4Q99466 2003 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 DMXL2Q8TDJ6 3036 aa5.63□□□□□ -1.51
CLCN3-203ENST00000502998 TRAV36DV7A0A075B6V5 113 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 LOC102723996A0A087X1L8 192 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 A0A0U1RRA0 63 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 OR2T8A6NH00 312 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 J3KT08 172 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 F2RL2O00254 374 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms