RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 C5orf66Q9H5L9 145 aa6.4□□□□□ -1.38
PDGFC-203ENST00000502773 TAF9BQ9HBM6 251 aa6.4□□□□□ -1.38
PDGFC-203ENST00000502773 DNAJC4Q9NNZ3 241 aa6.4□□□□□ -1.38
PDGFC-203ENST00000502773 MMP26Q9NRE1 261 aa6.4□□□□□ -1.38
PDGFC-203ENST00000502773 KIF26BQ2KJY2 2108 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 RNF222A6NCQ9 220 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 RBMXL2O75526 392 aaKnown RBP6.4□□□□□ -1.39
PDGFC-203ENST00000502773 HEXAP06865 529 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 OR13C7P0DN81 318 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 SLC25A6P12236 298 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 FOXL2P58012 376 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 ZNF92Q03936 586 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 SOHLH1Q5JUK2 328 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 ZNF610Q8N9Z0 462 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 ADAMTS17Q8TE56 1095 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 C1orf147Q96MC9 270 aaPredicted RBP6.4□□□□□ -1.39
PDGFC-203ENST00000502773 FAAP24Q9BTP7 215 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 ARV1Q9H2C2 271 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 LIN7CQ9NUP9 197 aaKnown RBP6.4□□□□□ -1.39
PDGFC-203ENST00000502773 OR14J1Q9UGF5 321 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 MPDZO75970 2070 aa6.4□□□□□ -1.39
PDGFC-203ENST00000502773 RAB29O14966 203 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 CYB5BO43169 146 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SNRPCP09234 159 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ARL3P36405 182 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 TAGLN2P37802 199 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 F2RL1P55085 397 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 Q0VFX4 171 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SNAI3Q3KNW1 292 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ZNF660Q6AZW8 331 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FAM169BQ8N8A8 192 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 TMEM100Q9NV29 134 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 TUBD1Q9UJT1 453 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PROCRQ9UNN8 238 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 LOC101059948A0A1B0GTJ6 334 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SS18L1O75177 396 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SCGB1D2O95969 90 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 TNFSF4P23510 183 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 OR3A1P47881 315 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 NPBWR1P48145 328 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ARSJQ5FYB0 599 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PRR27Q6MZM9 219 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 OR2AE1Q8NHA4 323 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 OR5B12Q96R08 314 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SOX7Q9BT81 388 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PATZ1Q9HBE1 687 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FOXJ2Q9P0K8 574 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 KPTNQ9Y664 436 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ATP23Q9Y6H3 246 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 F8VVB4 439 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 F8VWA3 439 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PHF1O43189 567 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SPRY1O43609 319 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 RFPL3SP0C7P2 107 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SEC11BP0C7V7 166 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 RAB5AP20339 215 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 GLRA1P23415 457 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 NOVA1P51513 510 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FXYD4P59646 89 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 LY6G6FQ5SQ64 297 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 C15orf54Q8N8G6 183 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SCGB1C1Q8TD33 95 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 RAB24Q969Q5 203 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 MUCL1Q96DR8 90 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SAMD10Q9BYL1 202 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 MRPL37Q9BZE1 423 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 BPTFQ12830 3046 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PRR33A8MZF0 331 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 M0QZK8 103 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SDCBPO00560 298 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 MPPED1O15442 326 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 GGCTO75223 188 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FREM3P0C091 2139 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 VDAC1P21796 283 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 FABP6P51161 128 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 SCGB2A2Q13296 93 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 CACNA1CQ13936 2221 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 DCAF12L2Q5VW00 463 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 DPPA3Q6W0C5 159 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 BCL2L2Q92843 193 aaPredicted RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 RAB40CQ96S21 281 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 CXXC4Q9H2H0 198 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 PRDM6Q9NQX0 595 aa6.39□□□□□ -1.39
PDGFC-203ENST00000502773 LSM5Q9Y4Y9 91 aaKnown RBP6.39□□□□□ -1.39
PDGFC-203ENST00000502773 C3orf85A0A1B0GTC6 90 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 OR5H1A6NKK0 313 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 FOXI3A8MTJ6 420 aaPredicted RBP6.38□□□□□ -1.39
PDGFC-203ENST00000502773 MPTX1A8MV57 137 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 MASP2O00187 686 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 PPYP01298 95 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 IGHG3P01860 377 aa6.38□□□□□ -1.39
PDGFC-203ENST00000502773 HNRNPA3P51991 378 aaKnown RBP6.38□□□□□ -1.39
PDGFC-203ENST00000502773 HBG1P69891 147 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms