RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CTF1Q16619 201 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 PAN3Q58A45 887 aaKnown RBP12.43□□□□□ -0.42
NUP50-219ENST00000497960 IDNKQ5T6J7 187 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 Q6P435 159 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 BRICD5Q6PL45 260 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 MALSU1Q96EH3 234 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
NUP50-219ENST00000497960 GAL3ST2Q9H3Q3 398 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 C16orf95Q9H693 158 aa12.43□□□□□ -0.42
NUP50-219ENST00000497960 TMEM272A0A1B0GTI8 110 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 CSN2P05814 226 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 PAX6P26367 422 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 TMBIM6P55061 237 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
NUP50-219ENST00000497960 QRFPP83859 136 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 AESQ08117 197 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 ATXN7L3Q14CW9 347 aaPredicted RBP12.42□□□□□ -0.42
NUP50-219ENST00000497960 KRBOX4Q5JUW0 171 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 ATAD3CQ5T2N8 411 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 LIAT1Q6ZQX7 453 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 NDNFQ8TB73 568 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 BCL7BQ9BQE9 202 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 DCSTAMPQ9H295 470 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 TMEM133Q9H2Q1 129 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 ABCB10Q9NRK6 738 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 TAS2R3Q9NYW6 316 aa12.42□□□□□ -0.42
NUP50-219ENST00000497960 IGHV2-26A0A0B4J1V2 119 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 ODAMA1E959 279 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A18PA6NE21 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A16PA6NEW6 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A20PA6NIJ5 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A7PA6NKC0 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A12PA8MX19 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A5PA8MXJ8 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A23PA8MXZ1 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A15PP0C7V4 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A13PP0C7W8 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A14PP0C7W9 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM90A24PP0C7X0 464 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
NUP50-219ENST00000497960 RPS19P39019 145 aaKnown RBP12.41□□□□□ -0.42
NUP50-219ENST00000497960 GLIPR1P48060 266 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 PROK1P58294 105 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 SRSF4Q08170 494 aaKnown RBP12.41□□□□□ -0.42
NUP50-219ENST00000497960 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 SSX2Q16385 188 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 C2orf76Q3KRA6 126 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 NKAPLQ5M9Q1 402 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 MINOS1Q5TGZ0 78 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 OR52W1Q6IF63 320 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 CROCCP3Q8IVE0 287 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 CORO2AQ92828 525 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 ISOC1Q96CN7 298 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 CLEC7AQ9BXN2 247 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 SPACA1Q9HBV2 294 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 MINOS1-NBL1R4GNA1 71 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 WNK1Q9H4A3 2382 aa12.41□□□□□ -0.42
NUP50-219ENST00000497960 TRAV24A0A0B4J272 114 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 PRAMEF5Q5TYX0 476 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 SLC35E4Q6ICL7 350 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 DTX3Q8N9I9 347 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 SLC25A46Q96AG3 418 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 NEDD4LQ96PU5 975 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 CITED1Q99966 193 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 DPCDQ9BVM2 203 aaPredicted RBP12.4□□□□□ -0.42
NUP50-219ENST00000497960 TM2D1Q9BX74 207 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 LPAR5Q9H1C0 372 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 IFT22Q9H7X7 185 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 OR6C3Q9NZP0 311 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 FBLN5Q9UBX5 448 aa12.4□□□□□ -0.42
NUP50-219ENST00000497960 TIMM23O14925 209 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 PDCD6O75340 191 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 MMP23AO75900 390 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 RAB6AP20340 208 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 CDK2P24941 298 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 SPCS2Q15005 226 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 RTN4RL2Q86UN3 420 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 ABHD12Q8N2K0 398 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 OR56B1Q8NGI3 324 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 PIFOQ8TCI5 191 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 COQ2Q96H96 371 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 RANBP3Q9H6Z4 567 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms