RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZNF695Q8IW36 515 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SPACA3Q8IXA5 215 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 PDZD9Q8IXQ8 264 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 BATF2Q8N1L9 274 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 WDR31Q8NA23 367 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 LILRB1Q8NHL6 650 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 SECTM1Q8WVN6 248 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ZCCHC14Q8WYQ9 949 aaKnown RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 DYRK2Q92630 601 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 RDH5Q92781 318 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 NINJ1Q92982 152 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 LRRC46Q96FV0 321 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 MARS2Q96GW9 593 aaKnown RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 SEC22AQ96IW7 307 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 BBC3Q96PG8 261 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 SLX1AQ9BQ83 275 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 CABLES2Q9BTV7 478 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SCNM1Q9BWG6 230 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SLC5A7Q9GZV3 580 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SLC25A32Q9H2D1 315 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 NGBQ9NPG2 151 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SLC2A9Q9NRM0 540 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 GSKIPQ9P0R6 139 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 UBE2J1Q9Y385 318 aaPredicted RBP5.89□□□□□ -1.47
USP39-219ENST00000496047 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 TMED3Q9Y3Q3 217 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SLC25A15Q9Y619 301 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
USP39-219ENST00000496047 YLPM1P49750 1951 aaKnown RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 TRAV14DV4A0A0A6YYC5 116 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 IGHV1-18A0A0C4DH31 117 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 C3orf85A0A1B0GTC6 90 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 E5RGE8 158 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 K7ENP7 123 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 SIRPB1O00241 398 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ATG12O94817 140 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 SPDEFO95238 335 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 OR2H2O95918 312 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 SCGB1D2O95969 90 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 HAND1O96004 215 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 CGAP01215 116 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 OR5AC1P0C628 307 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 PLA2G2AP14555 144 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 AADACP22760 399 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 CEACAM8P31997 349 aaPredicted RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 MPV17P39210 176 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ZNF83P51522 516 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 LUMP51884 338 aaPredicted RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 PSG7Q13046 419 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 GNMTQ14749 295 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ZNF146Q15072 292 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 PDCD1Q15116 288 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 TSC22D1Q15714 1073 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ANKRD55Q3KP44 614 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 PHLDA2Q53GA4 152 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 FAM76BQ5HYJ3 339 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ZNF660Q6AZW8 331 aaPredicted RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 TMEM108Q6UXF1 575 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 COMMD7Q86VX2 200 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 FAM90A1Q86YD7 464 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 LRTM2Q8N967 370 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 OR10Z1Q8NGY1 313 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 RNASE11Q8TAA1 199 aaKnown RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 MRPL30Q8TCC3 161 aaKnown RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 ST8SIA2Q92186 375 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 IL22RA2Q969J5 263 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ABHD14BQ96IU4 210 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 EAF1Q96JC9 268 aaPredicted RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 AKR1E2Q96JD6 320 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 NRIP2Q9BQI9 281 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 C1QTNF6Q9BXI9 259 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 HEXA-AS1Q9H8Q6 139 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 FN3KRPQ9HA64 309 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 PLEKHA2Q9HB19 425 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 LIN7CQ9NUP9 197 aaKnown RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 DKK4Q9UBT3 224 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 ZNF629Q9UEG4 869 aaPredicted RBP5.88□□□□□ -1.47
USP39-219ENST00000496047 OR14J1Q9UGF5 321 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 WASF3Q9UPY6 502 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 NSG2Q9Y328 171 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 TEX15Q9BXT5 2789 aa5.88□□□□□ -1.47
USP39-219ENST00000496047 PIEZO2Q9H5I5 2752 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 IGKV1D-8A0A087WSZ0 117 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 TRBV6-7A0A0A0MS04 114 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 BORCS7-ASMTA0A0B4J1R7 106 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ANKRD34BA5PLL1 514 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 OOEPA6NGQ2 149 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 NPIPB11E5RHQ5 1161 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 K7EPK0 472 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 IFNL4K9M1U5 179 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 WRBO00258 174 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 CDIPTO14735 213 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 ADAP1O75689 374 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 RHBDL1O75783 438 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 CDS2O95674 445 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 LYL1P12980 280 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 IRF2P14316 349 aa5.87□□□□□ -1.47
USP39-219ENST00000496047 GNRHRP30968 328 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms