RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 S100A12P80511 92 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 ZXDAP98168 799 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 TMEM267Q0VDI3 215 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-217ENST00000495688 C3AR1Q16581 482 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 LPAL2Q16609 132 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 HIKESHIQ53FT3 197 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 VASH2Q86V25 355 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 ZNF295-AS1Q8N0V1 137 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 A0A1B0GW64 132 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 FAM166BA8MTA8 275 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 WRBO00258 174 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 HSPA12AO43301 675 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 SLC34A2O95436 690 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 S100A8P05109 93 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
PTPN7-217ENST00000495688 RPS10P46783 165 aaKnown RBP11.11□□□□□ -0.63
PTPN7-217ENST00000495688 ICAM4Q14773 271 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 Q6ZRM9 215 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 PRR18Q8N4B5 295 aa11.11□□□□□ -0.63
PTPN7-217ENST00000495688 MRPL30Q8TCC3 161 aaKnown RBP11.11□□□□□ -0.63
PTPN7-217ENST00000495688 GTF3C1Q12789 2109 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 JMJD7P0C870 316 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 PSG2P11465 335 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 LHX2P50458 406 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 RAB1AP62820 205 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 CACNA1DQ01668 2161 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 MKXQ8IYA7 352 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 CMTM1Q8IZ96 169 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 MUCL1Q96DR8 90 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 THOC3Q96J01 351 aaKnown RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 ERRFI1Q9UJM3 462 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 TRAV24A0A0B4J272 114 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 CLEC18AA5D8T8 446 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A10PA6NDY2 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A18PA6NE21 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A16PA6NEW6 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A20PA6NIJ5 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A8PA6NJQ4 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A7PA6NKC0 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A12PA8MX19 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A5PA8MXJ8 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A23PA8MXZ1 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 RHBDL1O75783 438 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 NEURL1O76050 574 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 YIF1AO95070 293 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 SCAF4O95104 1147 aaKnown RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A15PP0C7V4 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A13PP0C7W8 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A14PP0C7W9 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 FAM90A24PP0C7X0 464 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 F2RP25116 425 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-217ENST00000495688 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 CLEC18CQ8NCF0 446 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 TMEM45BQ96B21 275 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
PTPN7-217ENST00000495688 CHD3Q12873 2000 aaKnown RBP11.09□□□□□ -0.63
PTPN7-217ENST00000495688 IGHV3-64DA0A0J9YX35 117 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 KIR2DS1A0A191URI9 304 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 AP4M1O00189 453 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 SERPINA7P05543 415 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 CXCL1P09341 107 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 PLA2G5P39877 138 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 MAGEA5P43359 124 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 KIR2DS4P43632 304 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 UBE2KP61086 200 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 DLK1P80370 383 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 AKR1C8PQ5T2L2 129 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 DCAF12Q5T6F0 453 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 TCEAL3Q969E4 200 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 ZNF251Q9BRH9 671 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 TNRC6AQ8NDV7 1962 aaKnown RBP11.09□□□□□ -0.63
PTPN7-217ENST00000495688 IGKV3D-15A0A087WSY6 115 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 H0Y980 276 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 CLDN18P56856 261 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 ERVFRD-1P60508 538 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 MPV17LQ2QL34 196 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 SPATA46Q5T0L3 261 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 OR2M7Q8NG81 312 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 OR5D13Q8NGL4 314 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 Q8WTZ3 238 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-217ENST00000495688 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 RSG1Q9BU20 258 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 ZNF703Q9H7S9 590 aaPredicted RBP11.09□□□□□ -0.63
PTPN7-217ENST00000495688 PLA2G3Q9NZ20 509 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
PTPN7-217ENST00000495688 DUSP3P51452 185 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF324BQ6AW86 544 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms