RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 CCDC197Q8NCU1 140 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 RTN4IP1Q8WWV3 396 aaPredicted RBP11.11□□□□□ -0.63
VARS-228ENST00000495010 ARL11Q969Q4 196 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
VARS-228ENST00000495010 EME1Q96AY2 570 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 OR5B12Q96R08 314 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 HSPB9Q9BQS6 159 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 CHCHD6Q9BRQ6 235 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 DPCDQ9BVM2 203 aaPredicted RBP11.11□□□□□ -0.63
VARS-228ENST00000495010 FAM192AQ9GZU8 254 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 TENM2Q9NT68 2774 aa11.11□□□□□ -0.63
VARS-228ENST00000495010 J3QLW9 94 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 OVOL1O14753 267 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 TXNL1O43396 289 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 IGF1P05019 195 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 RPSAP08865 295 aaKnown RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 ZNF19P17023 458 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 PAX5Q02548 391 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 ALKBH1Q13686 389 aaKnown RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 DNAL1Q4LDG9 190 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 SUMF2Q8NBJ7 301 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 PXT1Q8NFP0 134 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 OR52M1Q8NGK5 317 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 TNFAIP8L1Q8WVP5 186 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 MRPL48Q96GC5 212 aaKnown RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 GHITMQ9H3K2 345 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 PLSCR3Q9NRY6 295 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 ZNF107Q9UII5 783 aaPredicted RBP11.1□□□□□ -0.63
VARS-228ENST00000495010 POMPQ9Y244 141 aa11.1□□□□□ -0.63
VARS-228ENST00000495010 TMEM30CPA0ZSE6 113 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 HTR3BO95264 441 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 F2RL1P55085 397 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 ATP6AP1Q15904 470 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 PIGYQ3MUY2 71 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 FAM71E2Q8N5Q1 922 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 OR10K1Q8NGX5 313 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 CCDC107Q8WV48 283 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 TSEN15Q8WW01 171 aaKnown RBP11.09□□□□□ -0.63
VARS-228ENST00000495010 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 CIB1Q99828 191 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 IMPAD1Q9NX62 359 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 DHDHQ9UQ10 334 aa11.09□□□□□ -0.63
VARS-228ENST00000495010 IGHV3-43A0A0B4J1X8 118 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 OR4C45A6NMZ5 311 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
VARS-228ENST00000495010 I3L521 148 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 OR7C1O76099 320 aaPredicted RBP11.08□□□□□ -0.64
VARS-228ENST00000495010 IGHV3-43DP0DP04 118 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 SLC2A2P11168 524 aaPredicted RBP11.08□□□□□ -0.64
VARS-228ENST00000495010 GP9P14770 177 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 SPNP16150 400 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 RAB3AP20336 220 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 MYF6P23409 242 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 FASP25445 335 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 POLR2IP36954 125 aaKnown RBP11.08□□□□□ -0.64
VARS-228ENST00000495010 RUNX1Q01196 453 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 TMEM104Q8NE00 496 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 OR6Q1Q8NGQ2 317 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 ISOC1Q96CN7 298 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 C4orf36Q96KX1 117 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 S100A13Q99584 98 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 RAB9BQ9NP90 201 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 GFOD1Q9NXC2 390 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 ZNF580Q9UK33 172 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 ST3GAL6Q9Y274 331 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
VARS-228ENST00000495010 GABRPO00591 440 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 CSTBP04080 98 aaKnown RBP11.07□□□□□ -0.64
VARS-228ENST00000495010 GNB1P62873 340 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 MMDQ15546 238 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 STX19Q8N4C7 294 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 PARP16Q8N5Y8 322 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 ACBD7Q8N6N7 88 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 PELI1Q96FA3 418 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 KLK15Q9H2R5 256 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 ING4Q9UNL4 249 aa11.07□□□□□ -0.64
VARS-228ENST00000495010 TMEM212A6NML5 194 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 SNTNA6NMZ2 147 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 LDLRAD4O15165 306 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms