RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 DOK3Q7L591 496 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 NIT1Q86X76 327 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 SGMS2Q8NHU3 365 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 MRPL30Q8TCC3 161 aaKnown RBP4.12□□□□□ -1.75
PRKD3-210ENST00000494667 RAB1CQ92928 201 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 KCNK17Q96T54 332 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 MCTS1Q9ULC4 181 aaKnown RBP4.12□□□□□ -1.75
PRKD3-210ENST00000494667 HEBP2Q9Y5Z4 205 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM265A0A087WTH1 108 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CTXND1A0A1B0GTU2 59 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CCDC85CA6NKD9 419 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 SDCBPO00560 298 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-210ENST00000494667 AQP7O14520 342 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CD5LO43866 347 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 IGLC1P0CG04 106 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 VDAC1P21796 283 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 GABRA2P47869 451 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 PSMB3P49720 205 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 FUT7Q11130 342 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 ARFRP1Q13795 201 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 SPIN3Q5JUX0 258 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 OR4A47Q6IF82 309 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 PRR27Q6MZM9 219 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 MRPL54Q6P161 138 aaKnown RBP4.12□□□□□ -1.75
PRKD3-210ENST00000494667 DEFB128Q7Z7B8 93 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM123Q8N131 208 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 OR52R1Q8NGF1 315 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 VN1R17PQ8TDU5 208 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 NEIL1Q96FI4 390 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-210ENST00000494667 TAAR6Q96RI8 345 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 STARD5Q9NSY2 213 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 PLEK2Q9NYT0 353 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CLEC1BQ9P126 229 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 RFNGQ9Y644 331 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 SPACA6W5XKT8 324 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 TRAV9-2A0A087WT02 112 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 C3orf85A0A1B0GTC6 90 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 NKX2-6A6NCS4 301 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 PLPP3O14495 311 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 MPPED1O15442 326 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CLPSP04118 112 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 PRNPP04156 253 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 VWC2Q2TAL6 325 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 KRTCAP3Q53RY4 240 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 VASH2Q86V25 355 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 CA13Q8N1Q1 262 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 BCORP1Q8N888 145 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 ABHD3Q8WU67 409 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 ASB10Q8WXI3 467 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 ST20Q9HBF5 79 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 SLC7A10Q9NS82 523 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 DOCK3Q8IZD9 2030 aa4.12□□□□□ -1.75
PRKD3-210ENST00000494667 IGKV1-9A0A0C4DH69 117 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 LOC101059948A0A1B0GTJ6 334 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 MED19A0JLT2 244 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ANKUB1A6NFN9 424 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 CEBPZOSA8MTT3 80 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 H7C1C5 153 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 TNFRSF10CO14798 259 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 S1PR2O95136 353 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 IL33O95760 270 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 PPIAL4GP0DN37 164 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 CRISP2P16562 243 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 OR1D2P34982 312 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ABCA11PQ4W5N1 156 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM215Q68D42 235 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 CHRDL2Q6WN34 429 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RNF44Q7L0R7 432 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 C2orf73Q8N5S3 287 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 OR1E3Q8WZA6 343 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RELTQ969Z4 430 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 SPACA7Q96KW9 195 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ST6GALNAC5Q9BVH7 336 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 SSBP4Q9BWG4 385 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 HDAC8Q9BY41 377 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 WDR61Q9GZS3 305 aaKnown RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 KCNIP2Q9NS61 270 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 TMEM189A5PLL7 270 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ZFP92A6NM28 416 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 H0Y980 276 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ATXN7O15265 892 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RBFOX2O43251 390 aaKnown RBP eCLIP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 SLC16A7O60669 478 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ZNF20P17024 532 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RPS27P42677 84 aaKnown RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 LGALS4P56470 323 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RUNX1Q01196 453 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 HLA-DRB5Q30154 266 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 OR52L2PQ8NGH6 319 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 SLC25A40Q8TBP6 338 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 PP6455Q8WZ26 134 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 BCL2L2Q92843 193 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 LSM10Q969L4 123 aaKnown RBP4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RSG1Q9BU20 258 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 ZNF286AQ9HBT8 521 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 IL36BQ9NZH7 164 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 TAAR3PQ9P1P4 343 aa4.11□□□□□ -1.75
PRKD3-210ENST00000494667 RNF114Q9Y508 228 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms