RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RIPK1Q13546 671 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 RCN1Q15293 331 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 Q499Y3 187 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 TCTEX1D4Q5JR98 221 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 CCDC144NLQ6NUI1 221 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 GLIPR1L1Q6UWM5 242 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 STX19Q8N4C7 294 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 JAGN1Q8N5M9 183 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 DRAM1Q8N682 238 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 ZNF485Q8NCK3 441 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 SETD9Q8NE22 299 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 OR4F17Q8NGA8 305 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 OR10X1Q8NGY0 326 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 OR56B4Q8NH76 319 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 NEK7Q8TDX7 302 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 TOMM40LQ969M1 308 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 ARL11Q969Q4 196 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 MUL1Q969V5 352 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 RBMXL1Q96E39 390 aaKnown RBP7.64□□□□□ -1.19
MSH5-218ENST00000494646 CYYR1Q96J86 154 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 OR14A2Q96R54 314 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 OR4F4Q96R69 305 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 NCOR1P1Q9H4R4 102 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 LINC00527Q9UJ94 153 aa7.64□□□□□ -1.19
MSH5-218ENST00000494646 IGHV3-72A0A0B4J1Y9 119 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A18PA6NE21 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A16PA6NEW6 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A20PA6NIJ5 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A9PA6NNJ1 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A12PA8MX19 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A5PA8MXJ8 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 OOSP1A8MZH6 123 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 ZNF780AO75290 641 aaPredicted RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 GPX5O75715 221 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 MT-ND4P03905 459 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A15PP0C7V4 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A13PP0C7W8 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A14PP0C7W9 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 FAM90A24PP0C7X0 464 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 PF4V1P10720 104 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 GTF2F2P13984 249 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 IGLL1P15814 213 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 CELP19835 753 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 CAPGP40121 348 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 KCNJ3P48549 501 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 DOC2BQ14184 412 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 YIF1BQ5BJH7 314 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 AHSA2Q719I0 299 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 C5orf24Q7Z6I8 188 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 MOB3BQ86TA1 216 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 ZNF329Q86UD4 541 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 C8orf59Q8N0T1 100 aaPredicted RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 PACRGLQ8N7B6 248 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 SGCDQ92629 289 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 MYDGFQ969H8 173 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 PGLYRP3Q96LB9 341 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 BANF2Q9H503 90 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 LINC00574Q9H8X3 128 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 PCDHB16Q9NRJ7 776 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 PAK1IP1Q9NWT1 392 aaPredicted RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 IL36GQ9NZH8 169 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 CKLFQ9UBR5 152 aa7.63□□□□□ -1.19
MSH5-218ENST00000494646 MRPS28Q9Y2Q9 187 aaKnown RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 AMMECR1Q9Y4X0 333 aaPredicted RBP7.63□□□□□ -1.19
MSH5-218ENST00000494646 TRBV5-7A0A0A0MS05 114 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 A0A1W2PPI3 338 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 EFCAB10A6NFE3 127 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 MCRIP1C9JLW8 97 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 PTGES3LE9PB15 166 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 C15orf65H3BRN8 121 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 SDCBPO00560 298 aaPredicted RBP7.62□□□□□ -1.19
MSH5-218ENST00000494646 PIN1P1O15428 100 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 IGKV1D-33P01593 117 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 IGKV1-33P01594 117 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 TMEM11P17152 192 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 CD33P20138 364 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 RAB7AP51149 207 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 MADCAM1Q13477 382 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 INSL4Q14641 139 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 MPV17LQ2QL34 196 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 NHLRC3Q5JS37 347 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 KHDC1LQ5JSQ8 128 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 SYT6Q5T7P8 510 aaPredicted RBP7.62□□□□□ -1.19
MSH5-218ENST00000494646 PRR18Q8N4B5 295 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 NANOGP1Q8N7R0 232 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 OR10A7Q8NGE5 316 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 OR4K15Q8NH41 348 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 NOL4LQ96MY1 436 aaPredicted RBP7.62□□□□□ -1.19
MSH5-218ENST00000494646 SELENOIQ9C0D9 397 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 IFT22Q9H7X7 185 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 PSORS1C1Q9UIG5 152 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 TRAPPC2LQ9UL33 140 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 MOB4Q9Y3A3 225 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 TSSC4Q9Y5U2 329 aaPredicted RBP7.62□□□□□ -1.19
MSH5-218ENST00000494646 PEX16Q9Y5Y5 336 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 HSPE1-MOB4S4R3N1 261 aa7.62□□□□□ -1.19
MSH5-218ENST00000494646 UBE2QL1A1L167 161 aa7.61□□□□□ -1.19
MSH5-218ENST00000494646 PSMB11A5LHX3 300 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms