RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 WDR12Q9GZL7 423 aaKnown RBP12.32□□□□□ -0.44
ACTB-213ENST00000493945 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
ACTB-213ENST00000493945 MBNL3Q9NUK0 354 aaKnown RBP12.32□□□□□ -0.44
ACTB-213ENST00000493945 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
ACTB-213ENST00000493945 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
ACTB-213ENST00000493945 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
ACTB-213ENST00000493945 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 CTDSPLO15194 276 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 CD5LO43866 347 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 DIRAS3O95661 229 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
ACTB-213ENST00000493945 RCVRNP35243 200 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ETV6P41212 452 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 INPP1P49441 399 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 TAS2R46P59540 309 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ARPC4P59998 168 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 GUCA2AQ02747 115 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ACTBL2Q562R1 376 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 TMEM200BQ69YZ2 307 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 CCDC107Q8WV48 283 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 AUP1Q9Y679 476 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 CSMD2Q7Z408 3487 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
ACTB-213ENST00000493945 SETXQ7Z333 2677 aaKnown RBP12.3□□□□□ -0.44
ACTB-213ENST00000493945 TRDCB7Z8K6 153 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 HSPA12AO43301 675 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 RBBP9O75884 186 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 TOX4O94842 621 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 AP3S2P59780 193 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 ZNF273Q14593 569 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 PYDC2Q56P42 97 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
ACTB-213ENST00000493945 HEPN1Q6WQI6 88 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 Q6ZS49 121 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 CCDC190Q86UF4 302 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 OR13A1Q8NGR1 328 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 DYRK2Q92630 601 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 OCSTAMPQ9BR26 566 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 HEXA-AS1Q9H8Q6 139 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 TAF9BQ9HBM6 251 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 Q9N2K0 584 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 KCNK7Q9Y2U2 307 aa12.3□□□□□ -0.44
ACTB-213ENST00000493945 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
ACTB-213ENST00000493945 HLA-DQB1P01920 261 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 CSF1P09603 554 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 TBPP20226 339 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 FPR2P25090 351 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 ARF6P62330 175 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 HMGN3Q15651 99 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 Q3ZCU0 254 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 CHRFAM7AQ494W8 412 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 GDPD1Q8N9F7 314 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 OR52M1Q8NGK5 317 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 ST6GALNAC5Q9BVH7 336 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 IDI2-AS1Q9NZ38 188 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 ZNF107Q9UII5 783 aaPredicted RBP12.29□□□□□ -0.44
ACTB-213ENST00000493945 JPT1Q9UK76 154 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
ACTB-213ENST00000493945 ABCA1O95477 2261 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 C17orf98A8MV24 154 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 FABP7O15540 132 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 ZBTB25P24278 435 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 FAUP35544 74 aaKnown RBP12.28□□□□□ -0.44
ACTB-213ENST00000493945 OR3A3P47888 321 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 HTD2P86397 168 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 TRIQKQ629K1 86 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 OLFML2AQ68BL7 652 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 RTN4RL2Q86UN3 420 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 HOGA1Q86XE5 327 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 DTX3Q8N9I9 347 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 GPX8Q8TED1 209 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 FAM216AQ8WUB2 273 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 IL1F10Q8WWZ1 152 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 CREB3L1Q96BA8 519 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 GINS4Q9BRT9 223 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
ACTB-213ENST00000493945 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
ACTB-213ENST00000493945 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms