RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-210ENST00000493682 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 LIN7CQ9NUP9 197 aaKnown RBP13.64□□□□□ -0.23
COL9A1-210ENST00000493682 ORC6Q9Y5N6 252 aa13.64□□□□□ -0.23
COL9A1-210ENST00000493682 MAGEB3O15480 346 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 HTR3BO95264 441 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 GZMHP20718 246 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 GPR50Q13585 617 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 CXorf66Q5JRM2 361 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-210ENST00000493682 NKAPLQ5M9Q1 402 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 ASCL4Q6XD76 172 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 OR2T10Q8NGZ9 312 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 OR8U1Q8NH10 309 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 PRR25Q96S07 402 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 GON7Q9BXV9 100 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 FAM118AQ9NWS6 357 aa13.63□□□□□ -0.23
COL9A1-210ENST00000493682 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 EI24O14681 340 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 MPZL2O60487 215 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 GABRB1P18505 474 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 CDX1P47902 265 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-210ENST00000493682 RASSF2P50749 326 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 MRPL28Q13084 256 aaKnown RBP13.62□□□□□ -0.23
COL9A1-210ENST00000493682 FOXE3Q13461 319 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 FAM53AQ6NSI3 398 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-210ENST00000493682 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 TMEM104Q8NE00 496 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 OR5M8Q8NGP6 311 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 IFT22Q9H7X7 185 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 PLSCR3Q9NRY6 295 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 TAS2R4Q9NYW5 299 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
COL9A1-210ENST00000493682 TMEM30CPA0ZSE6 113 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 SDCBPO00560 298 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 OR7C1O76099 320 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 CDRT1O95170 752 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 SOX2P48431 317 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 GBX2P52951 348 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 NHLRC3Q5JS37 347 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 C9orf66Q5T8R8 295 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 LINC00311Q8N616 119 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 C8orf31Q8N9H6 132 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 OR52M1Q8NGK5 317 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 OR52N1Q8NH53 320 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 UBALD1Q8TB05 177 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 RTN4IP1Q8WWV3 396 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 RGP1Q92546 391 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-210ENST00000493682 ARL11Q969Q4 196 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 ST6GALNAC6Q969X2 333 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 GFOD1Q9NXC2 390 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 SCOCQ9UIL1 159 aa13.61□□□□□ -0.23
COL9A1-210ENST00000493682 SEC14L6B5MCN3 397 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 MOSP00540 346 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 ELANEP08246 267 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 CD1BP29016 333 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 ECI1P42126 302 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 RBM11P57052 281 aaKnown RBP13.6□□□□□ -0.23
COL9A1-210ENST00000493682 CFHR3Q02985 330 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 PYDC1Q8WXC3 89 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 S1PR3Q99500 378 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 RASL11BQ9BPW5 248 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 HSPB9Q9BQS6 159 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 METTL9Q9H1A3 318 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 AMBNQ9NP70 447 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 ING4Q9UNL4 249 aa13.6□□□□□ -0.23
COL9A1-210ENST00000493682 ZNF736B4DX44 427 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-210ENST00000493682 GEMIN2O14893 280 aaKnown RBP13.59□□□□□ -0.23
COL9A1-210ENST00000493682 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
COL9A1-210ENST00000493682 IGHG4P01861 327 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 IL3RAP26951 378 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 ALDH3A2P51648 485 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
COL9A1-210ENST00000493682 CCDC107Q8WV48 283 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 RBMXL1Q96E39 390 aaKnown RBP13.59□□□□□ -0.23
COL9A1-210ENST00000493682 ASCL2Q99929 193 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 GMPPBQ9Y5P6 360 aa13.59□□□□□ -0.23
COL9A1-210ENST00000493682 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 ORC5O43913 435 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 CIB2O75838 187 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 ATP5HO75947 161 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 MT-ND4P03905 459 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 CSTBP04080 98 aaKnown RBP13.58□□□□□ -0.24
COL9A1-210ENST00000493682 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 RAB40BQ12829 278 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 KLHL22Q53GT1 634 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 ATAD3CQ5T2N8 411 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 LINC00596Q86U02 117 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 OR8H1Q8NGG4 311 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 OR52I1Q8NGK6 324 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 GPR148Q8TDV2 347 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 C4orf3Q8WVX3 66 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 Q96MT0 163 aa13.58□□□□□ -0.24
COL9A1-210ENST00000493682 TMEM138Q9NPI0 162 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms