RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 SULT4A1Q9BR01 284 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 HEXA-AS1Q9H8Q6 139 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 UNKLQ9H9P5 680 aaKnown RBP9.46□□□□□ -0.9
CTSA-209ENST00000493522 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 CALYQ9NYX4 217 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 SOX21Q9Y651 276 aaPredicted RBP9.46□□□□□ -0.9
CTSA-209ENST00000493522 SESN1Q9Y6P5 492 aa9.46□□□□□ -0.9
CTSA-209ENST00000493522 MDFIC2A0A1B0GVS7 189 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 FAM172BPA6NC97 362 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 METTL21EPA6NDL7 271 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 IL1AP01583 271 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 GLAP06280 429 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 OMGP23515 440 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 SSTR5P35346 364 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 RPL5P46777 297 aaKnown RBP9.45□□□□□ -0.9
CTSA-209ENST00000493522 BPIFB3P59826 476 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 LTC4SQ16873 150 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 C17orf58Q2M2W7 97 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 PRR31Q5SQ13 230 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 RBMS3Q6XE24 437 aaKnown RBP9.45□□□□□ -0.9
CTSA-209ENST00000493522 C9orf139Q6ZV77 190 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 CLVS1Q8IUQ0 354 aaPredicted RBP9.45□□□□□ -0.9
CTSA-209ENST00000493522 CROCCP3Q8IVE0 287 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 SIGLECL1Q8N7X8 197 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 ZNF565Q8N9K5 539 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 OR13D1Q8NGV5 346 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 OR4K15Q8NH41 348 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 ARHGAP5-AS1Q96IT6 56 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 FAAP24Q9BTP7 215 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 ATG5Q9H1Y0 275 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 NCOR1P1Q9H4R4 102 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 CHMP1AQ9HD42 196 aaPredicted RBP9.45□□□□□ -0.9
CTSA-209ENST00000493522 TRAPPC2LQ9UL33 140 aa9.45□□□□□ -0.9
CTSA-209ENST00000493522 CMYA5Q8N3K9 4069 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 A0A075B6Q4 140 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 A0A0U1RQK1 487 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 FOXI3A8MTJ6 420 aaPredicted RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 NOL3O60936 208 aaKnown RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 CA11O75493 328 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 MMP23AO75900 390 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 PAHP00439 452 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 MT-ND4P03905 459 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 ARG1P05089 322 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 NFYBP25208 207 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 SAA4P35542 130 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 RPS19P39019 145 aaKnown RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 GDNFP39905 211 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 UBE2E1P51965 193 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 DYNC1I2Q13409 638 aaKnown RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 CTF1Q16619 201 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 DEFB112Q30KQ8 113 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 MOGAT2Q3SYC2 334 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 C6orf183Q5T699 404 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 OR52W1Q6IF63 320 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 HEPN1Q6WQI6 88 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 FAM89BQ8N5H3 189 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 OR5H6Q8NGV6 325 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 UBALD1Q8TB05 177 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 SETD6Q8TBK2 473 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 PTX4Q96A99 478 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 RAB3CQ96E17 227 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
CTSA-209ENST00000493522 CLEC7AQ9BXN2 247 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 PECRQ9BY49 303 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 TMEM133Q9H2Q1 129 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 RHBDL2Q9NX52 303 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 IDI2-AS1Q9NZ38 188 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 AK3Q9UIJ7 227 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 FAM96BQ9Y3D0 163 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 ETV7Q9Y603 341 aa9.44□□□□□ -0.9
CTSA-209ENST00000493522 IGHV2-26A0A0B4J1V2 119 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 LGALS4P56470 323 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 SCAND1P57086 179 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 FOXL1Q12952 345 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 TRAT1Q6PIZ9 186 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 BAIAP2L2Q6UXY1 529 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 Q6ZTK2 550 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 GAPTQ8N292 157 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 PRR18Q8N4B5 295 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 ZDHHC22Q8N966 263 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 OR10R2Q8NGX6 335 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 RFESDQ8TAC1 157 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 NDNFQ8TB73 568 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 ARL11Q969Q4 196 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 SLC25A46Q96AG3 418 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 KIRREL1Q96J84 757 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 ZNF747Q9BV97 191 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 DCSTAMPQ9H295 470 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 ZNF286AQ9HBT8 521 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 KCNIP1Q9NZI2 227 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 ABRACLQ9P1F3 81 aa9.43□□□□□ -0.9
CTSA-209ENST00000493522 HSF4Q9ULV5 492 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms