RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SBSPONQ8IVN8 264 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 SERPINA12Q8IW75 414 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 TMEM104Q8NE00 496 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 OR5D14Q8NGL3 314 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 MRGPRDQ8TDS7 321 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 LEAP2Q969E1 77 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 MRPL48Q96GC5 212 aaKnown RBP8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 S1PR3Q99500 378 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 GHITMQ9H3K2 345 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 VSIG4Q9Y279 399 aa8.58□□□□□ -1.04
SNRNP200-207ENST00000493271 TRAV24A0A0B4J272 114 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 HSPB6O14558 160 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 SULT1B1O43704 296 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 IGHV3-7P01780 117 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 HTR1AP08908 422 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 EPHA2P29317 976 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 SSTR5P35346 364 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF85Q03923 595 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 LTC4SQ16873 150 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 ZDHHC13Q8IUH4 622 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 OR6Q1Q8NGQ2 317 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 OR1N2Q8NGR9 330 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 RFESDQ8TAC1 157 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 RTN4IP1Q8WWV3 396 aaPredicted RBP8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 KCTD7Q96MP8 289 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 SPACA5Q96QH8 159 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 GABARAPL1Q9H0R8 117 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 OR51J1Q9H342 316 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 ISYNA1Q9NPH2 558 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 PLSCR3Q9NRY6 295 aa8.57□□□□□ -1.04
SNRNP200-207ENST00000493271 IGHV3-72A0A0B4J1Y9 119 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 I3L521 148 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 OVOL1O14753 267 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 SLC16A6O15403 523 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 MAGEB3O15480 346 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ORC5O43913 435 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 FRMD6-AS1P0C7T7 363 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF137PP52743 207 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 MRPL28Q13084 256 aaKnown RBP8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 GALEQ14376 348 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF691Q5VV52 312 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 LINC00596Q86U02 117 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 PARP16Q8N5Y8 322 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 TRUB1Q8WWH5 349 aaKnown RBP8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 EME1Q96AY2 570 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ISOC1Q96CN7 298 aa8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF107Q9UII5 783 aaPredicted RBP8.56□□□□□ -1.04
SNRNP200-207ENST00000493271 DAPL1A0PJW8 107 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 TMEM30CPA0ZSE6 113 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 SNTNA6NMZ2 147 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 OR4C45A6NMZ5 311 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 MITFO75030 526 aaPredicted RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 GP9P14770 177 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 REG1BP48304 166 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 NANOS3P60323 173 aaKnown RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 ALKBH1Q13686 389 aaKnown RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 ATP6AP1Q15904 470 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 C1orf146Q5VVC0 180 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 STEAP3Q658P3 488 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF491Q8N8L2 437 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 OR51A4Q8NGJ6 313 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 PLPPR1Q8TBJ4 325 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 ARL11Q969Q4 196 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 NR1H4Q96RI1 486 aaPredicted RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 GPER1Q99527 375 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 HSPB9Q9BQS6 159 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 TM2D3Q9BRN9 247 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 DPCDQ9BVM2 203 aaPredicted RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 GABARAPL3Q9BY60 117 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 POMPQ9Y244 141 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 MRPS28Q9Y2Q9 187 aaKnown RBP8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
SNRNP200-207ENST00000493271 A0A1W2PPE3 182 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 FAM90A10PA6NDY2 464 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 TMEM212A6NML5 194 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 A8MZ25 164 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 ARPC1BO15143 372 aaKnown RBP8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 LDLRAD4O15165 306 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 SAP30O75446 220 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 IGLV1-40P01703 118 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 OR8U9P0C7N5 309 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 RAB3AP20336 220 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 PPIFP30405 207 aaKnown RBP8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 RSU1Q15404 277 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 MPV17LQ2QL34 196 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 ASPHD1Q5U4P2 390 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 MEDAGQ5VYS4 303 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms