RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 NXF2Q9GZY0 626 aaKnown RBP7.84□□□□□ -1.15
CSTF1-206ENST00000493039 DNTTIP1Q9H147 329 aa7.84□□□□□ -1.15
CSTF1-206ENST00000493039 HMG20AQ9NP66 347 aa7.84□□□□□ -1.15
CSTF1-206ENST00000493039 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
CSTF1-206ENST00000493039 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
CSTF1-206ENST00000493039 POLDIP2Q9Y2S7 368 aa7.84□□□□□ -1.15
CSTF1-206ENST00000493039 PRRC2AP48634 2157 aaKnown RBP7.83□□□□□ -1.16
CSTF1-206ENST00000493039 IGHV3OR15-7A0A075B7D8 119 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 A0A0A6YYD4 124 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 TRAPPC2LH3BP13 241 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 RGS5O15539 181 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ZNF780AO75290 641 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-206ENST00000493039 LY86O95711 162 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 SERPINA2P20848 420 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 DUSP1P28562 367 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 CD80P33681 288 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 PDCD1Q15116 288 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 RSU1Q15404 277 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 PIGYQ3MUY2 71 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 RTN4RL2Q86UN3 420 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 BOLLQ8N9W6 283 aaKnown RBP7.83□□□□□ -1.16
CSTF1-206ENST00000493039 OR51T1Q8NGJ9 327 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 MITD1Q8WV92 249 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 SLC25A38Q96DW6 304 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 CPNE2Q96FN4 548 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-206ENST00000493039 CHODLQ9H9P2 273 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ELL3Q9HB65 397 aaPredicted RBP7.83□□□□□ -1.16
CSTF1-206ENST00000493039 GHRLQ9UBU3 117 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 IGKV1D-17A0A075B6S4 117 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 FCN3O75636 299 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 IFNA10P01566 189 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 PSG2P11465 335 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 MGMTP16455 207 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 GLRA1P23415 457 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 TMEM33P57088 247 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 FGF12P61328 243 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 SCGB2A2Q13296 93 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ZFP69Q49AA0 526 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 TEX36Q5VZQ5 186 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 FAM58AQ8N1B3 248 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ARRDC1Q8N5I2 433 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 DEFB108BQ8NET1 73 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 OR6F1Q8NGZ6 308 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 NICN1Q9BSH3 213 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 SLC5A7Q9GZV3 580 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 LPAR5Q9H1C0 372 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 MIXL1Q9H2W2 232 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 PRDM13Q9H4Q3 707 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ZNF222Q9UK12 451 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 MYO9AB2RTY4 2548 aa7.83□□□□□ -1.16
CSTF1-206ENST00000493039 ITPR3Q14573 2671 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 A0A0A6YYH2 397 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 A6NJ64 397 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 GEMIN2O14893 280 aaKnown RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 UBBP0CG47 229 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DNASE1P24855 282 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 ZNF146Q15072 292 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 RNF212Q495C1 297 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 OSR2Q8N2R0 312 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 CD177Q8N6Q3 437 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 OR11L1Q8NGX0 322 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 KCNG3Q8TAE7 436 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 NEK7Q8TDX7 302 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 KCTD12Q96CX2 325 aaKnown RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 Q96M66 194 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 CITED1Q99966 193 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 ZNF2Q9BSG1 426 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 ABRACLQ9P1F3 81 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 COMMD3Q9UBI1 195 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 MGAT4CQ9UBM8 478 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 METRNQ9UJH8 293 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 WIPI2Q9Y4P8 454 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 TANC2Q9HCD6 1990 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 PPIAL4EA0A075B759 164 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 A0A1B0GW55 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 LRRC30A6NM36 301 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 FOXI3A8MTJ6 420 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 PPIAL4DF5H284 164 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 IFNL4K9M1U5 179 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 LGALS8O00214 317 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 MPIG6BO95866 241 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 CYB5AP00167 134 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L2P0CJ85 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L3P0CJ86 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L4P0CJ87 422 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L5P0CJ88 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L6P0CJ89 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 DUX4L7P0CJ90 424 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 PPIAL4FP0DN26 164 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 GTF2F2P13984 249 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 SNU13P55769 128 aaKnown RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 TMEM50BP56557 158 aa7.82□□□□□ -1.16
CSTF1-206ENST00000493039 RBM11P57052 281 aaKnown RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 RPS27AP62979 156 aaKnown RBP7.82□□□□□ -1.16
CSTF1-206ENST00000493039 TAF9Q16594 264 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms