RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ETV3LQ6ZN32 361 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF497Q6ZNH5 498 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 SATL1Q86VE3 508 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 IZUMO1Q8IYV9 350 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 PACRGLQ8N7B6 248 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 RNF152Q8N8N0 203 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 OR4X2Q8NGF9 303 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 RFESDQ8TAC1 157 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 TOMM40LQ969M1 308 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 RCC1LQ96I51 464 aaKnown RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 EXOSC1Q9Y3B2 195 aaKnown RBP6.62□□□□□ -1.35
SMARCB1-207ENST00000491967 TRAV8-7A0A075B6U6 113 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 TRAV39A0A0B4J263 110 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 IGHV1-3A0A0C4DH29 117 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 MAGEA13PA6NCF6 341 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM90A10PA6NDY2 464 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM90A7PA6NKC0 464 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 SH2D7A6NKC9 451 aaPredicted RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM90A23PA8MXZ1 464 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 K7EIL1 84 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 SC5DO75845 299 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 OR7C1O76099 320 aaPredicted RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 CLIC3O95833 236 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 IGHV3-7P01780 117 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GLAP06280 429 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GTF2F2P13984 249 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 CD33P20138 364 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 CD1BP29016 333 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 VHLP40337 213 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 KRTAP10-11P60412 298 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 RPL23AP62750 156 aaKnown RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 PPP3R1P63098 170 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 SLC35A2P78381 396 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 RIPK1Q13546 671 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 DOC2BQ14184 412 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GPR176Q14439 515 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 RBM39Q14498 530 aaKnown RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 Q499Y3 187 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ARSJQ5FYB0 599 aaPredicted RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 DDI2Q5TDH0 399 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 TTC23Q5W5X9 447 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 TGIF2LXQ8IUE1 241 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 COMMD1Q8N668 190 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF439Q8NDP4 499 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF555Q8NEP9 628 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 OR13C5Q8NGS8 318 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 MRAPQ8TCY5 172 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 CHPT1Q8WUD6 406 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 SGCDQ92629 289 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GGHQ92820 318 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM80Q96HE8 168 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GPER1Q99527 375 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 P2RX4Q99571 388 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF184Q99676 751 aaPredicted RBP6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ZFP57Q9NU63 452 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 PLCXD1Q9NUJ7 323 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 FKBP14Q9NWM8 211 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 GFOD1Q9NXC2 390 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF580Q9UK33 172 aa6.61□□□□□ -1.35
SMARCB1-207ENST00000491967 A0A1W2PP11 408 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 A0A1W2PRX2 142 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 PSMB11A5LHX3 300 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 LINC01548A6NM66 108 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 HSD17B6O14756 317 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 CA11O75493 328 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 IGKV1D-33P01593 117 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 IGKV1-33P01594 117 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM11P17152 192 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 MYL12AP19105 171 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 THBS3P49746 956 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF134P52741 427 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 ST3GAL4Q11206 333 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 TMEM30BQ3MIR4 351 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 LY6G6FQ5SQ64 297 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 RNLSQ5VYX0 342 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 SIGIRRQ6IA17 410 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 OR2W3Q7Z3T1 314 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 ZNF554Q86TJ5 538 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 MRPL41Q8IXM3 137 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 Q8N9W7 124 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 RTN4IP1Q8WWV3 396 aaPredicted RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 DERL3Q96Q80 235 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 FAM192AQ9GZU8 254 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 ABCG5Q9H222 651 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 SPACA1Q9HBV2 294 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 MBNL3Q9NUK0 354 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 LIN7CQ9NUP9 197 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 CNOT2Q9NZN8 540 aaKnown RBP6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 PSORS1C1Q9UIG5 152 aa6.6□□□□□ -1.35
SMARCB1-207ENST00000491967 ING4Q9UNL4 249 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms