RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ALKBH6Q3KRA9 238 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 SPATA46Q5T0L3 261 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 ZNF529Q6P280 563 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 NAA40Q86UY6 237 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 ZNF525Q8N782 197 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 OR5H2Q8NGV7 314 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 KCNG3Q8TAE7 436 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 SLAMF6Q96DU3 332 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 CMSS1Q9BQ75 279 aaKnown RBP7.97□□□□□ -1.13
BRCA1-219ENST00000491747 LPAR5Q9H1C0 372 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 MOB1AQ9H8S9 216 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 PNRC2Q9NPJ4 139 aaKnown RBP7.97□□□□□ -1.13
BRCA1-219ENST00000491747 DUSP13Q9UII6 198 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 ANAPC10Q9UM13 185 aa7.97□□□□□ -1.13
BRCA1-219ENST00000491747 TEP1Q99973 2627 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 MEX3AA1L020 520 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 H7C1Q1 480 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 ADAP1O75689 374 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 CSTBP04080 98 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 MUC1P15941 1255 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 PAX6P26367 422 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 MPV17P39210 176 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 PPOXP50336 477 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 RAB5BP61020 215 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 FAM76BQ5HYJ3 339 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 OR10S1Q8NGN2 331 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 OR1F12Q8NHA8 337 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 SLC25A40Q8TBP6 338 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 C2CD4CQ8TF44 421 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 GTF3AQ92664 365 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 TMEM230Q96A57 120 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 MARS2Q96GW9 593 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 C2orf50Q96LR7 162 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 NICN1Q9BSH3 213 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 SLC5A7Q9GZV3 580 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 GSX1Q9H4S2 264 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 TAF9BQ9HBM6 251 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 OR5AC2Q9NZP5 309 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 MRPS28Q9Y2Q9 187 aaKnown RBP7.96□□□□□ -1.13
BRCA1-219ENST00000491747 POLR1DQ9Y2S0 133 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 POMT1Q9Y6A1 747 aa7.96□□□□□ -1.13
BRCA1-219ENST00000491747 YLPM1P49750 1951 aaKnown RBP7.96□□□□□ -1.14
BRCA1-219ENST00000491747 ACANP16112 2415 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 IGLV3-9A0A075B6K5 115 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 VSTM5A8MXK1 200 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 RNASEK-C17orf49H0YIS7 233 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 MED6O75586 246 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 MPIG6BO95866 241 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 SFTA3P0C7M3 94 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 KCNJ3P48549 501 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 EFNA4P52798 201 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 RPS23P62266 143 aaKnown RBP7.96□□□□□ -1.14
BRCA1-219ENST00000491747 GLIPR1L1Q6UWM5 242 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 PEG10Q86TG7 708 aaKnown RBP7.96□□□□□ -1.14
BRCA1-219ENST00000491747 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 GJC3Q8NFK1 279 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 CPNE2Q96FN4 548 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-219ENST00000491747 URM1Q9BTM9 101 aaKnown RBP7.96□□□□□ -1.14
BRCA1-219ENST00000491747 TMEM59Q9BXS4 323 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 BCL2L14Q9BZR8 327 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 OR2J1Q9GZK6 312 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 FAM96BQ9Y3D0 163 aa7.96□□□□□ -1.14
BRCA1-219ENST00000491747 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 MFNGO00587 321 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 SMAD7O15105 426 aaKnown RBP7.95□□□□□ -1.14
BRCA1-219ENST00000491747 NAT2P11245 290 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 FOLR2P14207 255 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 ANOS1P23352 680 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 NFYBP25208 207 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 F2RL1P55085 397 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 TAS2R46P59540 309 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 PPP1CBP62140 327 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 RAB32Q13637 225 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 ARFRP1Q13795 201 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 KRTAP27-1Q3LI81 207 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 COMMD2Q86X83 199 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 OR56B1Q8NGI3 324 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 SULT4A1Q9BR01 284 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 OCSTAMPQ9BR26 566 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 TAAR3PQ9P1P4 343 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 STARD10Q9Y365 291 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 SOCS1O15524 211 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 CDC14BO60729 498 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 CD5P06127 495 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 AMY2BP19961 511 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 SULT1A2P50226 295 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 S100A10P60903 97 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 SUPT4H1P63272 117 aaKnown RBP7.95□□□□□ -1.14
BRCA1-219ENST00000491747 HMGN3Q15651 99 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 PLAC9Q5JTB6 97 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 LHFPL1Q86WI0 220 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 ZFP82Q8N141 532 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 C15orf54Q8N8G6 183 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 TMEM104Q8NE00 496 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 KLF14Q8TD94 323 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-219ENST00000491747 C18orf12Q96KH6 178 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 DYNLRB1Q9NP97 96 aa7.95□□□□□ -1.14
BRCA1-219ENST00000491747 PARP11Q9NR21 331 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms