RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 MRPL48Q96GC5 212 aaKnown RBP8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 C4orf36Q96KX1 117 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 TBX5Q99593 518 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 GPR173Q9NS66 373 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 SORL1Q92673 2214 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 TMEM82A0PJX8 343 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 J3QLW9 94 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 CYB5AP00167 134 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 ELANEP08246 267 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 CD36P16671 472 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF19P17023 458 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 PSMB9P28065 219 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 FGF9P31371 208 aaPredicted RBP8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 CCR9P51686 369 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 GTF2A1P52655 376 aaPredicted RBP8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 RIDAP52758 137 aaKnown RBP8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 TAS2R43P59537 309 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 FOXE3Q13461 319 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 TP53I3Q53FA7 332 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 GPR107Q5VW38 600 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF429Q86V71 674 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 ANGPTL5Q86XS5 388 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 BATF2Q8N1L9 274 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 TPRX1Q8N7U7 411 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 CORO2AQ92828 525 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 TOMM40LQ969M1 308 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 PGLYRP3Q96LB9 341 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 NAA50Q9GZZ1 169 aaKnown RBP8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 V9GYS6 101 aa8.75□□□□□ -1.01
CLCNKA-206ENST00000491433 A0A087X0M5 115 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 A0A1B0GX30 115 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 TRDV1A0A1B0GX56 115 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 LY6LH3BQJ8 138 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 MMP23AO75900 390 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 KRT8P05787 483 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 OR8U8P0C7N1 319 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 PTGFRP43088 359 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RAB7AP51149 207 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 GBX2P52951 348 aaPredicted RBP8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 NANOS3P60323 173 aaKnown RBP8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RPS11P62280 158 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RBM39Q14498 530 aaKnown RBP8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 CDK5R1Q15078 307 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 SPIN3Q5JUX0 258 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 PRAMEF5Q5TYX0 476 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 OR8H3Q8N146 312 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RNF152Q8N8N0 203 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 OR9G1Q8NH87 305 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RAB2BQ8WUD1 216 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 C4orf3Q8WVX3 66 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 CHST6Q9GZX3 395 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 PLEKHA1Q9HB21 404 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 MTCH1Q9NZJ7 389 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 RSL24D1Q9UHA3 163 aaKnown RBP8.74□□□□□ -1.01
CLCNKA-206ENST00000491433 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM230AA0A1W2PPH8 454 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 OR4C45A6NMZ5 311 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 LOC110117498-PIK3R3F6TDL0 507 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 H3BMQ9 156 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 GPX5O75715 221 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 GATBO75879 557 aaKnown RBP8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 TTRP02766 147 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 FRMD6-AS1P0C7T7 363 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 CELP19835 753 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 GADD45AP24522 165 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 VEGFCP49767 419 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 FUT6P51993 359 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 FHL3Q13643 280 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF146Q15072 292 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 TRAM1Q15629 374 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 DEFB136Q30KP8 78 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 KIAA2026Q5HYC2 2103 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 BCL2L15Q5TBC7 163 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 LIPKQ5VXJ0 399 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 TMEM91Q6ZNR0 172 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 Q6ZSR3 168 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 CATSPERDQ86XM0 798 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 PRSS35Q8N3Z0 413 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 OR52N4Q8NGI2 321 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 OR2G2Q8NGZ5 317 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 IL17DQ8TAD2 202 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 SLAMF9Q96A28 289 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 SMIM19Q96E16 107 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 BORCS8Q96FH0 119 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF286AQ9HBT8 521 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 LINC00527Q9UJ94 153 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 GTF2A1LQ9UNN4 478 aa8.73□□□□□ -1.01
CLCNKA-206ENST00000491433 TRBV2A0A0J9YWF9 115 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF729A6NN14 1252 aaPredicted RBP8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 SH2D1BO14796 132 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 LDLRAD4O15165 306 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 PSPNO60542 156 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 SERPINA3P01011 423 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 ISG15P05161 165 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 HSMCR30P0CW71 290 aa8.72□□□□□ -1.01
CLCNKA-206ENST00000491433 PSMA1P25786 263 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms