RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 ATP6V1G2O95670 118 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 MT-ND4P03905 459 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 UBBP0CG47 229 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 SRMP19623 302 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 NFYBP25208 207 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 SSTR5P35346 364 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 RBM48Q5RL73 367 aaKnown RBP12.21□□□□□ -0.45
COL27A1-206ENST00000490831 TPTE2P1Q5T6R2 138 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 LIPKQ5VXJ0 399 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 TREML4Q6UXN2 200 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 C16orf82Q7Z2V1 217 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 CEACAM19Q7Z692 300 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 TMEM219Q86XT9 240 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 BANF2Q9H503 90 aa12.21□□□□□ -0.45
COL27A1-206ENST00000490831 CMYA5Q8N3K9 4069 aa12.21□□□□□ -0.46
COL27A1-206ENST00000490831 TRAV39A0A0B4J263 110 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 MCRIP1C9JLW8 97 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 H3BUI4 141 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 ORC5O43913 435 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CA11O75493 328 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CPEP16870 476 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 PSMA1P25786 263 aaKnown RBP12.2□□□□□ -0.46
COL27A1-206ENST00000490831 BRS3P32247 399 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 ARHGDIBP52566 201 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 RBM39Q14498 530 aaKnown RBP12.2□□□□□ -0.46
COL27A1-206ENST00000490831 TRAM1Q15629 374 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-206ENST00000490831 HSD17B12Q53GQ0 312 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 GLT8D1Q68CQ7 371 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 SIGIRRQ6IA17 410 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CCDC144NLQ6NUI1 221 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 TMEM91Q6ZNR0 172 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CFHR4Q92496 578 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CNBD2Q96M20 576 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 CST11Q9H112 138 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 SERTAD4Q9NUC0 356 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 PSG11Q9UQ72 335 aa12.2□□□□□ -0.46
COL27A1-206ENST00000490831 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
COL27A1-206ENST00000490831 VWFP04275 2813 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 M0QZ24 198 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 AIPO00170 330 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 SLC22A1O15245 554 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 CRTAPO75718 401 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-206ENST00000490831 FUT3P21217 361 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 VHLP40337 213 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 HERPUD1Q15011 391 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 Q3ZCU0 254 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 RAB12Q6IQ22 244 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 C8orf31Q8N9H6 132 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-206ENST00000490831 MGLLQ99685 303 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 PRSS22Q9GZN4 317 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 LIN7BQ9HAP6 207 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 BLOC1S6Q9UL45 172 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 PEX16Q9Y5Y5 336 aa12.19□□□□□ -0.46
COL27A1-206ENST00000490831 FAM90A9PA6NNJ1 464 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 PDCD6O75340 191 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 HSMCR30P0CW71 290 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 VSIG8P0DPA2 414 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 MAP2K4P45985 399 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 LOXL3P58215 753 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 RPS25P62851 125 aaKnown RBP12.18□□□□□ -0.46
COL27A1-206ENST00000490831 QRFPP83859 136 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 LINC00311Q8N616 119 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 NEK7Q8TDX7 302 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 LEAP2Q969E1 77 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 ARL11Q969Q4 196 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 ETAA1Q9NY74 926 aa12.18□□□□□ -0.46
COL27A1-206ENST00000490831 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 MRPS14O60783 128 aaKnown RBP12.17□□□□□ -0.46
COL27A1-206ENST00000490831 OR2F2O95006 317 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 HTR2CP28335 458 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 MNDAP41218 407 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 BLCAPP62952 87 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
COL27A1-206ENST00000490831 MADCAM1Q13477 382 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 FBLN7Q53RD9 439 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 TRAT1Q6PIZ9 186 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 ZNF367Q7RTV3 350 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 OR6M1Q8NGM8 313 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 KCNG3Q8TAE7 436 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 CCDC107Q8WV48 283 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 TOMM40LQ969M1 308 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 RPEQ96AT9 228 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
COL27A1-206ENST00000490831 GFI1Q99684 422 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 TM2D1Q9BX74 207 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 MMP27Q9H306 513 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms