RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SFXN4Q6P4A7 337 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PAMR1Q6UXH9 720 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ALKAL1Q6UXT8 129 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 DNM1P46Q6ZS02 220 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF720Q7Z2F6 126 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OAFQ86UD1 273 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TAC4Q86UU9 113 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 COMMD7Q86VX2 200 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 DEFB123Q8N688 67 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR11H7Q8NGC8 314 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR11L1Q8NGX0 322 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR10X1Q8NGY0 326 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR10Z1Q8NGY1 313 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR6K3Q8NGY3 331 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 OR51Q1Q8NH59 317 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 NEIL3Q8TAT5 605 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 STOML3Q8TAV4 291 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZFAND1Q8TCF1 268 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TMA16Q96EY4 203 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC45A3Q96JT2 553 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ZIM3Q96PE6 472 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SH3GL3Q99963 347 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 RTBDNQ9BSG5 229 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 PECRQ9BY49 303 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SAMD10Q9BYL1 202 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 MRPS26Q9BYN8 205 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 ULBP1Q9BZM6 244 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC22A4Q9H015 551 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SHPKQ9UHJ6 478 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC7A11Q9UPY5 501 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SIGLEC7Q9Y286 467 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 BTRCQ9Y297 605 aa2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.31□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM131Q92545 1883 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TRIP11Q15643 1979 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 DOCK6Q96HP0 2047 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TRAV8-6A0A0B4J262 113 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 H3BP45 60 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 FFAR1O14842 300 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TRBV12-3P01733 135 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF708P17019 499 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF30P17039 623 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 CXCL2P19875 107 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 CXCR1P25024 350 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 F2RP25116 425 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 GDF1P27539 372 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 GCLMP48507 274 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 CYB561P49447 251 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 CRYBA4P53673 196 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 MTPNP58546 118 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TAS2R19P59542 299 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 PSME3P61289 254 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 ARG2P78540 354 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 GTF2BQ00403 316 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 NRF1Q16656 503 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC25A35Q3KQZ1 300 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TTC32Q5I0X7 151 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TSPO2Q5TGU0 170 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 SPATA31B1PQ5VZV4 182 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM205Q6UW68 189 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 GPD1LQ8N335 351 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM86BQ8N661 226 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 NPRL2Q8WTW4 380 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 ASB13Q8WXK3 278 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 RERGQ96A58 199 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 HAUS1Q96CS2 278 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 AURKBQ96GD4 344 aaPredicted RBP2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 BTN2A3PQ96KV6 586 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 BIRC8Q96P09 236 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 METTL26Q96S19 204 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 MED18Q9BUE0 208 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TMED9Q9BVK6 235 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 TLNRD1Q9H1K6 362 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 SPNS1Q9H2V7 528 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC2A9Q9NRM0 540 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC7A10Q9NS82 523 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 MARCH5Q9NX47 278 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 C14orf166Q9Y224 244 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 KIAA1671Q9BY89 1806 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 PTPRJQ12913 1337 aa2.3□□□□□ -2.04
DEPDC1-204ENST00000489862 C2orf16Q68DN1 1984 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 DNAH14Q0VDD8 3507 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 USP34Q70CQ2 3546 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A087WUJ7 227 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 IGHV3OR16-9A0A0B4J2B5 98 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 FUOMA2VDF0 154 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 OR6C6A6NF89 314 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 ARL5CA6NH57 179 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 C2orf74A8MZ97 194 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 SRRM5B3KS81 715 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 C5orf67F2Z3F1 127 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 F5H5K5 113 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 UBDO15205 165 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 NDUFS5O43920 106 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 GLSO94925 669 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 TNNC2P02585 160 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 APOEP02649 317 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms