RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ZNF695Q8IW36 515 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 OR8B12Q8NGG6 310 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 OR4F5Q8NH21 305 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 RHBDD1Q8TEB9 315 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 DGAT2Q96PD7 388 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 OR4F4Q96R69 305 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ZFYVE21Q9BQ24 234 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 MAP1LC3BQ9GZQ8 125 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 PLEKHF2Q9H8W4 249 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 Q9N2K0 584 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 OR6C3Q9NZP0 311 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 C2orf16Q68DN1 1984 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 F5H5K5 113 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 CDS2O95674 445 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 SMIM10L1P0DMW3 83 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF17P17021 662 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 DTX1Q86Y01 620 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 APH1AQ96BI3 265 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 SMIM10Q96HG1 83 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 PGAM5Q96HS1 289 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 TXNIPQ9H3M7 391 aa14□□□□□ -0.17
MCF2L-229ENST00000488765 LTBP2Q14767 1821 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 TNFSF13O75888 250 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 IAPPP10997 89 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 FFAR4Q5NUL3 377 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 Q6ZSR6 202 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 KMT5CQ86Y97 462 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 FAM122AQ96E09 287 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 C1QTNF9BB2RNN3 333 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 OR2J2O76002 312 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 SPINK2P20155 84 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 CDKN1BP46527 198 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 ATP6V1FQ16864 119 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM183BQ1AE95 376 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 D2HGDHQ8N465 521 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF519Q8TB69 540 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM204Q9BSN7 226 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 RAB11FIP5Q9BXF6 653 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF552Q9H707 407 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-229ENST00000488765 ZNF286AQ9HBT8 521 aa13.99□□□□□ -0.17
MCF2L-229ENST00000488765 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
MCF2L-229ENST00000488765 CXorf51AA0A1B0GTR3 108 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 B4DGG1 531 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 NPIPA5E9PKD4 350 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 GOSR1O95249 250 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 RIPPLY3P57055 190 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 SOX8P57073 446 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 VAMP3Q15836 100 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 COA6Q5JTJ3 125 aaKnown RBP13.98□□□□□ -0.17
MCF2L-229ENST00000488765 ACTL10Q5JWF8 245 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 TPTE2P1Q5T6R2 138 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 TECTBQ96PL2 329 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 HRASLS2Q9NWW9 162 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 CLEC1BQ9P126 229 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 NPIPA1Q9UND3 350 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 AQP7P3A6NL99 342 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 HBE1P02100 147 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 CRYAAP02489 173 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 FRMD6-AS1P0C7T7 363 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 IL3RAP26951 378 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 FOXL2P58012 376 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 PMP22Q01453 160 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 C16orf47Q6ZP98 133 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-229ENST00000488765 SLC38A9Q8NBW4 561 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 OR1K1Q8NGR3 316 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 LHX4Q969G2 390 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 BMFQ96LC9 184 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 TMEM242Q9NWH2 141 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 SELENOTP62341 195 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 WFDC8Q8IUA0 241 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 OR13H1Q8NG92 308 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 C18orf12Q96KH6 178 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 SLC25A22Q9H936 323 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 VDAC3Q9Y277 283 aa13.98□□□□□ -0.17
MCF2L-229ENST00000488765 RBM7Q9Y580 266 aaKnown RBP13.98□□□□□ -0.17
MCF2L-229ENST00000488765 ITGB1BP1O14713 200 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 SERF1AO75920 110 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 HRASP01112 189 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 CTSEP14091 401 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 EXT1Q16394 746 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 C1orf185Q5T7R7 199 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 PARLQ9H300 379 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 HSPB2A8KAH6 182 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 HSPB6O14558 160 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 GDF9O60383 454 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 PITX3O75364 302 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 CBLN1P23435 193 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 ADMP35318 185 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 HSPB2Q16082 182 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.97□□□□□ -0.17
MCF2L-229ENST00000488765 OR4D5Q8NGN0 318 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 TM4SF19Q96DZ7 209 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 NAT8Q9UHE5 227 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 CD207Q9UJ71 328 aa13.97□□□□□ -0.17
MCF2L-229ENST00000488765 TRAV36DV7A0A075B6V5 113 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 A8MXE2 369 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 TDGF1P13385 188 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 PDLIM4P50479 330 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 BAGE3Q86Y29 109 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms