RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SLC33A1O00400 549 aaPredicted RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 CD200P41217 278 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 CEBPDP49716 269 aaPredicted RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 ASCL1P50553 236 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 ADORA2A-AS1P86434 159 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 ATXN7L3Q14CW9 347 aaPredicted RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 PAN3Q58A45 887 aaKnown RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 THAP6Q8TBB0 222 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 LRRC46Q96FV0 321 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 C1orf123Q9NWV4 160 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 CACNA1DQ01668 2161 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 PTBP3O95758 552 aaKnown RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 GLRA1P23415 457 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 CHRNB4P30926 498 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 IGSF11Q5DX21 431 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 BEX5Q5H9J7 111 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 Q6ZS49 121 aa17.05■□□□□ 0.32
NECAB3-213ENST00000488489 MRPL30Q8TCC3 161 aaKnown RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 MRPL24Q96A35 216 aaKnown RBP17.05■□□□□ 0.32
NECAB3-213ENST00000488489 HIVEP3Q5T1R4 2406 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 ANKHD1Q8IWZ3 2542 aaKnown RBP17.04■□□□□ 0.32
NECAB3-213ENST00000488489 PKDREJQ9NTG1 2253 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 NKX2-6A6NCS4 301 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 TMEM8BA6NDV4 472 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 FAM90A27PA6NNH2 459 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 MPTX1A8MV57 137 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 SPRY3O43610 288 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 GLAP06280 429 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 SPIN3Q5JUX0 258 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 TMEM185AQ8NFB2 350 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 BPIFCQ8NFQ6 507 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 OR2V2Q96R30 315 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 DECR2Q9NUI1 292 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 OR14J1Q9UGF5 321 aa17.04■□□□□ 0.32
NECAB3-213ENST00000488489 DUS4LO95620 317 aaKnown RBP17.03■□□□□ 0.32
NECAB3-213ENST00000488489 SCTP09683 121 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 GRNP28799 593 aaKnown RBP17.03■□□□□ 0.32
NECAB3-213ENST00000488489 RBM39Q14498 530 aaKnown RBP17.03■□□□□ 0.32
NECAB3-213ENST00000488489 SRSF7Q16629 238 aaKnown RBP eCLIP17.03■□□□□ 0.328e-10■□□□□ 9.8
NECAB3-213ENST00000488489 ACP7Q6ZNF0 438 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 SSX8Q7RTT4 187 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 ARPC5LQ9BPX5 153 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 CFAP46Q8IYW2 2715 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 FAM25EA8MYX2 175 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 SH2D1BO14796 132 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 HAND1O96004 215 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 TFF1P04155 84 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 VAMP1P23763 118 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 TMEM128Q5BJH2 165 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 ADAM5Q6NVV9 412 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 UQCC3Q6UW78 93 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 INO80EQ8NBZ0 244 aaPredicted RBP17.03■□□□□ 0.32
NECAB3-213ENST00000488489 PLPPR1Q8TBJ4 325 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 MBD2Q9UBB5 411 aa17.03■□□□□ 0.32
NECAB3-213ENST00000488489 DBX1A6NMT0 343 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 SIGLEC5O15389 551 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 PSPNO60542 156 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 RCC1P18754 421 aaPredicted RBP17.02■□□□□ 0.32
NECAB3-213ENST00000488489 FCGR2CP31995 323 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 DEFA5Q01523 94 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 MZT1Q08AG7 82 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 FBXL19-AS1Q494R0 122 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 MEGF10Q96KG7 1140 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 SCGB3A2Q96PL1 93 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 IGSF10Q6WRI0 2623 aa17.02■□□□□ 0.32
NECAB3-213ENST00000488489 F5H0A9 414 aaPredicted RBP17.02■□□□□ 0.31
NECAB3-213ENST00000488489 TAS2R31P59538 309 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 SELENOVP59797 346 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 SUPT4H1P63272 117 aaKnown RBP17.02■□□□□ 0.31
NECAB3-213ENST00000488489 HERPUD1Q15011 391 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 SURF2Q15527 256 aaPredicted RBP17.02■□□□□ 0.31
NECAB3-213ENST00000488489 ADIPOQQ15848 244 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 CLRN3Q8NCR9 226 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 CASTOR1Q8WTX7 329 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 LRRC29Q8WV35 223 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 RIMS4Q9H426 269 aaPredicted RBP17.02■□□□□ 0.31
NECAB3-213ENST00000488489 ATP23Q9Y6H3 246 aa17.02■□□□□ 0.31
NECAB3-213ENST00000488489 KIAA2026Q5HYC2 2103 aa17.01■□□□□ 0.31
NECAB3-213ENST00000488489 TRBV6-6A0A0A6YYG2 114 aa17.01■□□□□ 0.31
NECAB3-213ENST00000488489 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.01■□□□□ 0.31
NECAB3-213ENST00000488489 ZNF880Q6PDB4 577 aa17.01■□□□□ 0.31
NECAB3-213ENST00000488489 STOML3Q8TAV4 291 aa17.01■□□□□ 0.31
NECAB3-213ENST00000488489 NKX6-2Q9C056 277 aaPredicted RBP17.01■□□□□ 0.31
NECAB3-213ENST00000488489 IGKV1-6A0A0C4DH72 117 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 RAB19A4D1S5 217 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 PGAM2P15259 253 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 EGR1P18146 543 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 LMO1P25800 156 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 KCTD9Q7L273 389 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 LINC01560Q8TB33 94 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 ITLN1Q8WWA0 313 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 MARC2Q969Z3 335 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 PCDHB10Q9UN67 800 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 TRAV39A0A0B4J263 110 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 FAM74A7A6NL05 159 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 TRDCB7Z8K6 153 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 KNG1P01042 644 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 IGHV1-46P01743 117 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 OR4A8P0C604 315 aa17■□□□□ 0.31
NECAB3-213ENST00000488489 RPS2P15880 293 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms