RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CITED1Q99966 193 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 ACOT13Q9NPJ3 140 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 SCOCQ9UIL1 159 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
COL9A2-208ENST00000488463 BUB1B-PAK6H3BSN5 160 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 HTR1DP28221 377 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 FABP5Q01469 135 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
COL9A2-208ENST00000488463 FAM189A2Q15884 450 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 HLA-DRB5Q30154 266 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 ATAD3CQ5T2N8 411 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 OR10K2Q6IF99 312 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 SGMS2Q8NHU3 365 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 RFESDQ8TAC1 157 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 MRPS26Q9BYN8 205 aaKnown RBP11.42□□□□□ -0.58
COL9A2-208ENST00000488463 SELENOIQ9C0D9 397 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 TCF7L1Q9HCS4 588 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 GHRLQ9UBU3 117 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 FBLN5Q9UBX5 448 aa11.42□□□□□ -0.58
COL9A2-208ENST00000488463 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 CRTAPO75718 401 aaPredicted RBP11.41□□□□□ -0.58
COL9A2-208ENST00000488463 PSMA1P25786 263 aaKnown RBP11.41□□□□□ -0.58
COL9A2-208ENST00000488463 GABRA5P31644 462 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 KIR2DS4P43632 304 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 EFNB2P52799 333 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 UNC119Q13432 240 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 TRAM1Q15629 374 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 PRR31Q5SQ13 230 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 GLT8D1Q68CQ7 371 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 ZNF367Q7RTV3 350 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 OR10A7Q8NGE5 316 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 NDNFQ8TB73 568 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 ZNF596Q8TC21 504 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 LEAP2Q969E1 77 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 FAM46BQ96A09 425 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 KCNK15Q9H427 330 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 SPACA1Q9HBV2 294 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 PSG11Q9UQ72 335 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
COL9A2-208ENST00000488463 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 J3QR06 171 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 WIPF1O43516 503 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 GLAP06280 429 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 UBBP0CG47 229 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 GZMHP20718 246 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 FUT3P21217 361 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 NFYBP25208 207 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 LOXL3P58215 753 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 RPS27AP62979 156 aaKnown RBP11.4□□□□□ -0.58
COL9A2-208ENST00000488463 TPTE2P1Q5T6R2 138 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
COL9A2-208ENST00000488463 TMEM219Q86XT9 240 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 SPARTQ8N0X7 666 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 Q8N2B8 174 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 OR9G1Q8NH87 305 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 MMP28Q9H239 520 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 RANBP3Q9H6Z4 567 aaPredicted RBP11.4□□□□□ -0.58
COL9A2-208ENST00000488463 NDUFB11Q9NX14 153 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
COL9A2-208ENST00000488463 SHISA3A0PJX4 238 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 LEUTXA8MZ59 168 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 C12orf77C9JDV5 145 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 F2RL2O00254 374 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 ORC5O43913 435 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 PDCD6O75340 191 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 CHATP28329 748 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 HTR2CP28335 458 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 Q6ZPA2 131 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 Q6ZS46 218 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 SLC16A12Q6ZSM3 486 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 OR52M1Q8NGK5 317 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 UBALD1Q8TB05 177 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 CCDC107Q8WV48 283 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 TM2D1Q9BX74 207 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 CST11Q9H112 138 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 ZNF702PQ9H963 129 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 RAB18Q9NP72 206 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 ETAA1Q9NY74 926 aa11.39□□□□□ -0.59
COL9A2-208ENST00000488463 AK6Q9Y3D8 172 aaKnown RBP11.39□□□□□ -0.59
COL9A2-208ENST00000488463 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 FOXI3A8MTJ6 420 aaPredicted RBP11.38□□□□□ -0.59
COL9A2-208ENST00000488463 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 AIPO00170 330 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 SLC17A2O00624 439 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 CA11O75493 328 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 ARL6IP5O75915 188 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 BPNT1O95861 308 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 MPIG6BO95866 241 aa11.38□□□□□ -0.59
COL9A2-208ENST00000488463 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
COL9A2-208ENST00000488463 CD24P25063 80 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms