RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RPL26P61254 145 aaKnown RBP2.2□□□□□ -2.06
ITGB1-214ENST00000488427 CRADDP78560 199 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 GUSBP1Q15486 140 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 UBE2UQ5VVX9 321 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 SLC16A13Q7RTY0 426 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 TBC1D21Q8IYX1 336 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 C2orf73Q8N5S3 287 aaPredicted RBP2.2□□□□□ -2.06
ITGB1-214ENST00000488427 DEFB108BQ8NET1 73 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 OR52E2Q8NGJ4 325 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 C17orf50Q8WW18 174 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 TMEM230Q96A57 120 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 OR5B12Q96R08 314 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 RNF122Q9H9V4 155 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 PROK2Q9HC23 129 aa2.2□□□□□ -2.06
ITGB1-214ENST00000488427 RPL26L1Q9UNX3 145 aaKnown RBP2.2□□□□□ -2.06
ITGB1-214ENST00000488427 FSIP2Q5CZC0 6907 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 SMCO3A2RU48 225 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 H7C0C1 242 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 FOXE1O00358 373 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 SOCS1O15524 211 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 RDH16O75452 317 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF735P0CB33 412 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF708P17019 499 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 CD9P21926 228 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 MAGEA1P43355 309 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 ATP5OP48047 213 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 CLDN18P56856 261 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 PPP1CBP62140 327 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 LCN2P80188 198 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 SLC25A11Q02978 314 aaKnown RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 DDX39BQ13838 428 aaKnown RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF791Q3KP31 576 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 MPV17L2Q567V2 206 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 C9orf135Q5VTT2 229 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 DNAJC24Q6P3W2 148 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 RNASEKQ6P5S7 137 aaKnown RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 SPINT4Q6UDR6 99 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 C1orf174Q8IYL3 243 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 TMEM256Q8N2U0 113 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 RIBC1Q8N443 379 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 OR8J1Q8NGP2 316 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 OR5K2Q8NHB8 316 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 KCNG3Q8TAE7 436 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 FNDC9Q8TBE3 224 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 HBEGFQ99075 208 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 C1orf50Q9BV19 199 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 GON7Q9BXV9 100 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 STMN4Q9H169 189 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 TMEM165Q9HC07 324 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 FBXO6Q9NRD1 293 aaPredicted RBP2.19□□□□□ -2.06
ITGB1-214ENST00000488427 DMAC2Q9NW81 257 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 LGALS13Q9UHV8 139 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 ST3GAL6Q9Y274 331 aa2.19□□□□□ -2.06
ITGB1-214ENST00000488427 LRP2P98164 4655 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 IGKV2-24A0A0C4DH68 120 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF860A6NHJ4 632 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 H0YC42 278 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 M0R1B8 84 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 NUPL2O15504 423 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 EIF4E2O60573 245 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 EIF1BO60739 113 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 FKBP6O75344 327 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 SNX4O95219 450 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF43P17038 809 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 PSMB5P28074 263 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 GPX4P36969 197 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 EIF1P41567 113 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ASIPP42127 132 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 PRLHRP49683 370 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ARFIP1P53367 373 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 TMEM33P57088 247 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 STXBP1P61764 594 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 BTG2P78543 158 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 GBE1Q04446 702 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF616Q08AN1 781 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 TIMM23BQ5SRD1 257 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 LGALS9CQ6DKI2 356 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 FAM151BQ6UXP7 276 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 BRD3OSQ6XYD6 125 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 GABRG1Q8N1C3 465 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ZCCHC24Q8N2G6 241 aaKnown RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 COX18Q8N8Q8 333 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 LINC00304Q8N9R0 145 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 CHST4Q8NCG5 386 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 NAT14Q8WUY8 206 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 TPD52L3Q96J77 140 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 C8orf76Q96K31 380 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ZNF488Q96MN9 340 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 RILPQ96NA2 401 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 TM2D3Q9BRN9 247 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 OR52D1Q9H346 318 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 VPS37BQ9H9H4 285 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 ANKHQ9HCJ1 492 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 DYNLRB1Q9NP97 96 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 DNAJC12Q9UKB3 198 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 CBY1Q9Y3M2 126 aa2.18□□□□□ -2.06
ITGB1-214ENST00000488427 CHCHD2Q9Y6H1 151 aaPredicted RBP2.18□□□□□ -2.06
ITGB1-214ENST00000488427 USH1CQ9Y6N9 552 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms