RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 RIMBP3CA6NJZ7 1639 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 RIMBP3BA6NNM3 1639 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TRPM1Q7Z4N2 1603 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 MED14O60244 1454 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 TCOF1Q13428 1488 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 CHD2O14647 1828 aaKnown RBP0.85□□□□□ -2.27
SMC4-220ENST00000488017 DOCK2Q92608 1830 aa0.85□□□□□ -2.27
SMC4-220ENST00000488017 CROCC2H7BZ55 1655 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TET3O43151 1660 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 RAB3GAP2Q9H2M9 1393 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 DIP2AQ14689 1571 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ZFYVE9O95405 1425 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 NCOA1Q15788 1441 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SMG6Q86US8 1419 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 ADGRL3Q9HAR2 1447 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 A0A0B4J2C4 111 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA8QA0A0J9YX86 632 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 LOC389332A0A1B0GUA5 103 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA6L10A6NI86 522 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SMIM23A6NLE4 172 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TMEM210A6NLX4 147 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ZNF729A6NN14 1252 aaPredicted RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 A8MWP4 228 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GGTLC3B5MD39 225 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TMEM238C9JI98 176 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GOLGA8KD6RF30 607 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TOR1AO14656 332 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 RGS5O15539 181 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SYNGR2O43760 224 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SHOX2O60902 331 aaPredicted RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 SCN2BO60939 215 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR2A4O95047 310 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 IGKV1D-33P01593 117 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 IGKV1-33P01594 117 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 FABP1P07148 127 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SERPINA6P08185 405 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR4E1P0C645 316 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GIMD1P0DJR0 217 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 LIPCP11150 499 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ZNF708P17019 499 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TAC1P20366 129 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 IVDP26440 423 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CAPZBP47756 277 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SERPINB9P50453 376 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 NUDT2P50583 147 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SLC18A1P54219 525 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ATP5J2P56134 94 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 MAP3K7CLP57077 242 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TMEM33P57088 247 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 KRTAP12-1P59990 96 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ERVS71-1P61550 626 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 PSPHP78330 225 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 DYNC1I2Q13409 638 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 ENDOGQ14249 297 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 PDK2Q15119 407 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 KCNJ8Q15842 424 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SSX1Q16384 188 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 KRTAP21-3Q3LHN1 58 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CDNFQ49AH0 187 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 DNAL1Q4LDG9 190 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TTMPQ5BVD1 217 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CLLU1OSQ5K130 101 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 BRMS1LQ5PSV4 323 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ERICH5Q6P6B1 374 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CYHR1Q6ZMK1 362 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TPGS1Q6ZTW0 290 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SETD3Q86TU7 594 aaPredicted RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 LINC00596Q86U02 117 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TAC4Q86UU9 113 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 GID4Q8IVV7 300 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 AMN1Q8IY45 258 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 SELENOHQ8IZQ5 122 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 ZFP82Q8N141 532 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TCAIMQ8N3R3 496 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 LRRC18Q8N456 261 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR51L1Q8NGJ5 315 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR5H2Q8NGV7 314 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 ZFAND1Q8TCF1 268 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 DTD1Q8TEA8 209 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 PDCD6IPQ8WUM4 868 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR5P3Q8WZ94 311 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 LRRC39Q96DD0 335 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 RMND5BQ96G75 393 aaPredicted RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 CENPNQ96H22 339 aaPredicted RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 ANKRD36BP1Q96IX9 119 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CEP19Q96LK0 163 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 OR2A7Q96R45 310 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 CYTH2Q99418 400 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TSC22D3Q99576 134 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TSNAXQ99598 290 aaKnown RBP0.84□□□□□ -2.27
SMC4-220ENST00000488017 KIFC1Q9BW19 673 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 DERL2Q9GZP9 239 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 IL22Q9GZX6 179 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 COA1Q9GZY4 146 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 PARVBQ9HBI1 364 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TAC3Q9UHF0 121 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 PYCARDQ9ULZ3 195 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 STK38LQ9Y2H1 464 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 TRAPPC1Q9Y5R8 145 aa0.84□□□□□ -2.27
SMC4-220ENST00000488017 INSIG2Q9Y5U4 225 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms