RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 FAM240AA0A1B0GVK7 77 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 MIF4GDA9UHW6 222 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 C9JQL5 133 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 D6RAR5 112 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 H0YC42 278 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 H3BQ85 93 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 KPNA4O00629 521 aaPredicted RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 GYG2O15488 501 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 EDF1O60869 148 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 DEXIO95424 95 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 ETHE1O95571 254 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 KRT75O95678 551 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 SNAI1O95863 264 aaPredicted RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 OCM2P0CE71 109 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 OCMP0CE72 109 aaPredicted RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 PRKACAP17612 351 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 TAC1P20366 129 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 HADHBP55084 474 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 TAS2R60P59551 318 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 RPL31P62899 125 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 MOGQ16653 247 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 ATP6V1FQ16864 119 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 RGS21Q2M5E4 152 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 SPOPLQ6IQ16 392 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 UGT2A3Q6UWM9 527 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 IZUMO2Q6UXV1 221 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 SLC51BQ86UW2 128 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 LRRC6Q86X45 466 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 ACTL9Q8TC94 416 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 NT5CQ8TCD5 201 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 FAM172AQ8WUF8 416 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 C10orf82Q8WW14 230 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 RBPMSQ93062 196 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 PPP1R36Q96LQ0 422 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 DHRS9Q9BPW9 319 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 NDEL1Q9GZM8 345 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 FBXO44Q9H4M3 255 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 TDRD3Q9H7E2 651 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 NOSIPQ9Y314 301 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 KPTNQ9Y664 436 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 MYH13Q9UKX3 1938 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 MYO5AQ9Y4I1 1855 aaKnown RBP2.24□□□□□ -2.05
USP48-209ENST00000487880 LAMA4Q16363 1823 aa2.24□□□□□ -2.05
USP48-209ENST00000487880 MROH5Q6ZUA9 1318 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 C4AP0C0L4 1744 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 C4BP0C0L5 1744 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 GOLGA8QA0A0J9YX86 632 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 LOC100653049A0A140TA62 436 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 LOC105371267A0A1B0GV96 52 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 EVPLLA8MZ36 301 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 BOLA2-SMG1P6H3BVE0 249 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 H7C2Y5 167 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 GOLGA8RI6L899 631 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ACOX3O15254 700 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 AQP9O43315 295 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ENTPD6O75354 484 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 SULT1C4O75897 302 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 KRT34O76011 436 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 TGFBR2P37173 567 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 P2RY2P41231 377 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 EIF2B2P49770 351 aaKnown RBP2.23□□□□□ -2.05
USP48-209ENST00000487880 FOXA1P55317 472 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 GNG2P59768 71 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 NAA20P61599 178 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 STX3Q13277 289 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ELOCQ15369 112 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ALX1Q15699 326 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ZNF141Q15928 474 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 PYDC2Q56P42 97 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 HSP90AA4PQ58FG1 418 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 CLLU1OSQ5K130 101 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 OGFRL1Q5TC84 451 aaPredicted RBP2.23□□□□□ -2.05
USP48-209ENST00000487880 ARPINQ7Z6K5 226 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 GRPEL2Q8TAA5 225 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 CMTM2Q8TAZ6 248 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 BCL7BQ9BQE9 202 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 MROQ9BYG7 248 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 SHCBP1LQ9BZQ2 653 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 COA1Q9GZY4 146 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 BOLA2Q9H3K6 86 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 FAM96AQ9H5X1 160 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ASB7Q9H672 318 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 RPRD1BQ9NQG5 326 aaKnown RBP2.23□□□□□ -2.05
USP48-209ENST00000487880 C8orf4Q9NR00 106 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 DDIT4Q9NX09 232 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ATPIF1Q9UII2 106 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 ERGIC3Q9Y282 383 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 AP4S1Q9Y587 144 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 HEY1Q9Y5J3 304 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 MYH10P35580 1976 aa2.23□□□□□ -2.05
USP48-209ENST00000487880 MON2Q7Z3U7 1717 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 MYO3BQ8WXR4 1341 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 C3P01024 1663 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 A0A087WXM4 84 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 CCDC160A6NGH7 325 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 M0R1B8 84 aa2.22□□□□□ -2.05
USP48-209ENST00000487880 RNF113AO15541 343 aaKnown RBP2.22□□□□□ -2.05
USP48-209ENST00000487880 SULT1B1O43704 296 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms