RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FAM90A13PP0C7W8 464 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 FAM90A14PP0C7W9 464 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 FAM90A24PP0C7X0 464 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 GTF2F2P13984 249 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 IGLL1P15814 213 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 SERPINA2P20848 420 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 GPR176Q14439 515 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 SLC22A6Q4U2R8 563 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 STX19Q8N4C7 294 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 SETD9Q8NE22 299 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 ARL11Q969Q4 196 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
SREBF1-215ENST00000487401 ZNF581Q9P0T4 197 aa9.9□□□□□ -0.82
SREBF1-215ENST00000487401 TET2Q6N021 2002 aaPredicted RBP9.89□□□□□ -0.83
SREBF1-215ENST00000487401 A0A1W2PPE3 182 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 CCRL2O00421 344 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 GAPDHP04406 335 aaKnown RBP9.89□□□□□ -0.83
SREBF1-215ENST00000487401 SLC35A2P78381 396 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 LRRC36Q1X8D7 754 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 MPV17LQ2QL34 196 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 Q499Y3 187 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 FOXB2Q5VYV0 432 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 MOB3BQ86TA1 216 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 OR13C5Q8NGS8 318 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 CCDC107Q8WV48 283 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 ORAI1Q96D31 301 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 VCX3BQ9H321 246 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
SREBF1-215ENST00000487401 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
SREBF1-215ENST00000487401 TRBV5-5A0A0J9YX44 114 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 SERPINE3A8MV23 424 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 MCRIP1C9JLW8 97 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 SDCBPO00560 298 aaPredicted RBP9.88□□□□□ -0.83
SREBF1-215ENST00000487401 FGF16O43320 207 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 GPX5O75715 221 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 IGKV1D-33P01593 117 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 IGKV1-33P01594 117 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 MT-ND4P03905 459 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 IGFBP3P17936 291 aaPredicted RBP9.88□□□□□ -0.83
SREBF1-215ENST00000487401 IL3RAP26951 378 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
SREBF1-215ENST00000487401 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 ZNF329Q86UD4 541 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 DHRSXQ8N5I4 330 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 JAGN1Q8N5M9 183 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 PACRGLQ8N7B6 248 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 ZFP41Q8N8Y5 198 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 OR52M1Q8NGK5 317 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 CHPT1Q8WUD6 406 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 GGHQ92820 318 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
SREBF1-215ENST00000487401 VCXQ9H320 206 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 SPACA1Q9HBV2 294 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 RAB9BQ9NP90 201 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
SREBF1-215ENST00000487401 A0A1W2PPK0 400 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 EFCAB10A6NFE3 127 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 NCBP2LA6PVI3 153 aaKnown RBP9.87□□□□□ -0.83
SREBF1-215ENST00000487401 AIPO00170 330 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 HSD17B6O14756 317 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 CASQ2O14958 399 aaPredicted RBP9.87□□□□□ -0.83
SREBF1-215ENST00000487401 ORC5O43913 435 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 LALBAP00709 142 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 REG1BP48304 166 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 TAS2R43P59537 309 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 SLC35B1P78383 322 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 ST3GAL4Q11206 333 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 GLIPR1L1Q6UWM5 242 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 ZNF497Q6ZNH5 498 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 C5orf56Q8N8D9 126 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 OR51D1Q8NGF3 324 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 UBALD1Q8TB05 177 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 MUL1Q969V5 352 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 MRPS24Q96EL2 167 aaKnown RBP9.87□□□□□ -0.83
SREBF1-215ENST00000487401 GFOD1Q9NXC2 390 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 TRAPPC2LQ9UL33 140 aa9.87□□□□□ -0.83
SREBF1-215ENST00000487401 MRPS28Q9Y2Q9 187 aaKnown RBP9.87□□□□□ -0.83
SREBF1-215ENST00000487401 TRAV8-7A0A075B6U6 113 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 TRBV5-7A0A0A0MS05 114 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 IGHV3-72A0A0B4J1Y9 119 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 IGHV1-3A0A0C4DH29 117 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 PNMA8CA0A1B0GUJ8 204 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 A0A1W2PP11 408 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 DPPA5A6NC42 116 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 NUDT19A8MXV4 375 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 C15orf65H3BRN8 121 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 SPINT2O43291 252 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
SREBF1-215ENST00000487401 MPIG6BO95866 241 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 RPS11P62280 158 aaKnown RBP eCLIP9.86□□□□□ -0.83
SREBF1-215ENST00000487401 ADARB1P78563 741 aaKnown RBP9.86□□□□□ -0.83
SREBF1-215ENST00000487401 ZNF816Q0VGE8 651 aaPredicted RBP9.86□□□□□ -0.83
SREBF1-215ENST00000487401 IZUMO2Q6UXV1 221 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 SLC35E3Q7Z769 313 aa9.86□□□□□ -0.83
SREBF1-215ENST00000487401 FOXRED2Q8IWF2 684 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms