RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 TOR1AO14656 332 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 VENTXO95231 258 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 MT-ND4P03905 459 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
LIMS3-205ENST00000487150 SMIM18P0DKX4 95 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 SDC2P34741 201 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 PRRX1P54821 245 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 CLDN12P56749 244 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 Q3ZCU0 254 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 SIGIRRQ6IA17 410 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 OR52M1Q8NGK5 317 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 ZNF48Q96MX3 618 aaPredicted RBP11.93□□□□□ -0.5
LIMS3-205ENST00000487150 C12orf4Q9NQ89 552 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 IDI2-AS1Q9NZ38 188 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 DAPK2Q9UIK4 370 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
LIMS3-205ENST00000487150 TMEM272A0A1B0GTI8 110 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
LIMS3-205ENST00000487150 HOXA3O43365 443 aaPredicted RBP11.92□□□□□ -0.5
LIMS3-205ENST00000487150 MELTFP08582 738 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 HTR1DP28221 377 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 ACTG1P63261 375 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 OR13F1Q8NGS4 319 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 OR9G1Q8NH87 305 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 NDNFQ8TB73 568 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 PHF21AQ96BD5 680 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 CENPOQ9BU64 300 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 CHMP1AQ9HD42 196 aaPredicted RBP11.92□□□□□ -0.5
LIMS3-205ENST00000487150 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
LIMS3-205ENST00000487150 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 ABRACLQ9P1F3 81 aa11.92□□□□□ -0.5
LIMS3-205ENST00000487150 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 CRYBA1P05813 215 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 CGB3P0DN86 165 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 CGB7P0DN87 165 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 NFYBP25208 207 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 SSTR5P35346 364 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 DLX1P56177 255 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 C6orf201Q7Z4U5 140 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 RAB3CQ96E17 227 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 NICN1Q9BSH3 213 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 FUNDC2Q9BWH2 189 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 RAB18Q9NP72 206 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
LIMS3-205ENST00000487150 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 VGLL3A8MV65 326 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 OOSP1A8MZH6 123 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 SDCBPO00560 298 aaPredicted RBP11.9□□□□□ -0.5
LIMS3-205ENST00000487150 OMGP23515 440 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 IER3P46695 156 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 VEGFCP49767 419 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
LIMS3-205ENST00000487150 MXD1Q05195 221 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 KRTAP24-1Q3LI83 254 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 STEAP3Q658P3 488 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 Q6ZTK2 550 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 GPR141Q7Z602 305 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 NR2C2APQ86WQ0 139 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 DTX3Q8N9I9 347 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 DYRK2Q92630 601 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 SULT4A1Q9BR01 284 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 MEGF9Q9H1U4 602 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 VPREB3Q9UKI3 123 aa11.9□□□□□ -0.5
LIMS3-205ENST00000487150 ATRQ13535 2644 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 A0A0A6YYH2 397 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 A6NJ64 397 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 F2RL2O00254 374 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 SOCS1O15524 211 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 RGS11O94810 467 aa11.89□□□□□ -0.51
LIMS3-205ENST00000487150 LPLP06858 475 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms