RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ARL11Q969Q4 196 aa19.46■□□□□ 0.71
LIME1-206ENST00000487026 NOL4LQ96MY1 436 aaPredicted RBP19.46■□□□□ 0.71
LIME1-206ENST00000487026 LINC00527Q9UJ94 153 aa19.46■□□□□ 0.71
LIME1-206ENST00000487026 EXOSC1Q9Y3B2 195 aaKnown RBP19.46■□□□□ 0.71
LIME1-206ENST00000487026 TMEM30CPA0ZSE6 113 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 PSMB11A5LHX3 300 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 IGKV1D-33P01593 117 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 IGKV1-33P01594 117 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 IGFBP3P17936 291 aaPredicted RBP19.45■□□□□ 0.7
LIME1-206ENST00000487026 GZMHP20718 246 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 REG1BP48304 166 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 DMKNQ6E0U4 476 aaPredicted RBP19.45■□□□□ 0.7
LIME1-206ENST00000487026 SLC16A12Q6ZSM3 486 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 C5orf56Q8N8D9 126 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 TMEM80Q96HE8 168 aa19.45■□□□□ 0.7
LIME1-206ENST00000487026 TRAV8-7A0A075B6U6 113 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 TRBV5-5A0A0J9YX44 114 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 A0A1W2PPK0 400 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 IRGMA1A4Y4 181 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 C15orf65H3BRN8 121 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 RPS11P62280 158 aaKnown RBP eCLIP19.44■□□□□ 0.7
LIME1-206ENST00000487026 MOB3BQ86TA1 216 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 OR8H3Q8N146 312 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 NEK7Q8TDX7 302 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 GGHQ92820 318 aa19.44■□□□□ 0.7
LIME1-206ENST00000487026 PAK1IP1Q9NWT1 392 aaPredicted RBP19.44■□□□□ 0.7
LIME1-206ENST00000487026 IGHV3-43A0A0B4J1X8 118 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 IGHV3-72A0A0B4J1Y9 119 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 HSD17B6O14756 317 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 MPIG6BO95866 241 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 IGHV3-43DP0DP04 118 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 Q499Y3 187 aa19.43■□□□□ 0.7
LIME1-206ENST00000487026 CHCHD3Q9NX63 227 aaKnown RBP19.43■□□□□ 0.7
LIME1-206ENST00000487026 PNMA8CA0A1B0GUJ8 204 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 CCRL2O00421 344 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 SDCBPO00560 298 aaPredicted RBP19.42■□□□□ 0.7
LIME1-206ENST00000487026 GPX5O75715 221 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 MT-ND4P03905 459 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 GTF2F2P13984 249 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 SLC35A2P78381 396 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 TTC23Q5W5X9 447 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 LINC00596Q86U02 117 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 ZNF485Q8NCK3 441 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 MUL1Q969V5 352 aa19.42■□□□□ 0.7
LIME1-206ENST00000487026 IGHV1-3A0A0C4DH29 117 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 LINC01548A6NM66 108 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 SERPINE3A8MV23 424 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 ZNF780AO75290 641 aaPredicted RBP19.41■□□□□ 0.7
LIME1-206ENST00000487026 GAPDHP04406 335 aaKnown RBP19.41■□□□□ 0.7
LIME1-206ENST00000487026 ADARB1P78563 741 aaKnown RBP19.41■□□□□ 0.7
LIME1-206ENST00000487026 ZNF816Q0VGE8 651 aaPredicted RBP19.41■□□□□ 0.7
LIME1-206ENST00000487026 ST3GAL4Q11206 333 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 MPV17LQ2QL34 196 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 YIF1BQ5BJH7 314 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 ZNF497Q6ZNH5 498 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 C18orf65Q6ZTR6 163 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 JAGN1Q8N5M9 183 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 RBMXL1Q96E39 390 aaKnown RBP19.41■□□□□ 0.7
LIME1-206ENST00000487026 PGLYRP3Q96LB9 341 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 OR14A2Q96R54 314 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 CKLFQ9UBR5 152 aa19.41■□□□□ 0.7
LIME1-206ENST00000487026 FGF16O43320 207 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 KRTAP10-11P60412 298 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 GABPB1Q06547 395 aaPredicted RBP19.4■□□□□ 0.7
LIME1-206ENST00000487026 GLIPR1L1Q6UWM5 242 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 DHRSXQ8N5I4 330 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 OR52M1Q8NGK5 317 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 CHPT1Q8WUD6 406 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 RCC1LQ96I51 464 aaKnown RBP19.4■□□□□ 0.7
LIME1-206ENST00000487026 EAF1Q96JC9 268 aaPredicted RBP19.4■□□□□ 0.7
LIME1-206ENST00000487026 GFOD1Q9NXC2 390 aa19.4■□□□□ 0.7
LIME1-206ENST00000487026 MRPS28Q9Y2Q9 187 aaKnown RBP19.4■□□□□ 0.7
LIME1-206ENST00000487026 TRBV5-7A0A0A0MS05 114 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 NCBP2LA6PVI3 153 aaKnown RBP19.39■□□□□ 0.69
LIME1-206ENST00000487026 AIPO00170 330 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 ORC5O43913 435 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 MAS1P04201 325 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 MED21Q13503 144 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 EBI3Q14213 229 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 SLC35E3Q7Z769 313 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 LINC00482Q8N8I6 264 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 SETD9Q8NE22 299 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 CYYR1Q96J86 154 aa19.39■□□□□ 0.69
LIME1-206ENST00000487026 K7EIL1 84 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 SLC31A2O15432 143 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 IGHG2P01859 326 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 RPL23AP62750 156 aaKnown RBP19.38■□□□□ 0.69
LIME1-206ENST00000487026 DOC2BQ14184 412 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 GPR176Q14439 515 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 SYT6Q5T7P8 510 aaPredicted RBP19.38■□□□□ 0.69
LIME1-206ENST00000487026 ETV3LQ6ZN32 361 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 MRPL41Q8IXM3 137 aaKnown RBP19.38■□□□□ 0.69
LIME1-206ENST00000487026 STX19Q8N4C7 294 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 LINC00311Q8N616 119 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 OR4K15Q8NH41 348 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 BANF2Q9H503 90 aa19.38■□□□□ 0.69
LIME1-206ENST00000487026 ZNF736B4DX44 427 aaPredicted RBP19.37■□□□□ 0.69
LIME1-206ENST00000487026 C12orf77C9JDV5 145 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 MCRIP1C9JLW8 97 aa19.37■□□□□ 0.69
LIME1-206ENST00000487026 FSTP19883 344 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms