RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 GPR171O14626 319 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 EEF1E1O43324 174 aaKnown RBP2.26□□□□□ -2.05
SMC4-218ENST00000486711 CGB3P0DN86 165 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 CGB7P0DN87 165 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 CD151P48509 253 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 INPP1P49441 399 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 DHRS2Q13268 280 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 TTC33Q6PID6 262 aaPredicted RBP2.26□□□□□ -2.05
SMC4-218ENST00000486711 SPATA24Q86W54 205 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 NIT1Q86X76 327 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 SLC13A5Q86YT5 568 aaPredicted RBP2.26□□□□□ -2.05
SMC4-218ENST00000486711 MUC15Q8N387 334 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 OR4A5Q8NH83 315 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 HIGD2AQ9BW72 106 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 UGT2B28Q9BY64 529 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 C1orf109Q9NX04 203 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 ZNF230Q9UIE0 474 aaPredicted RBP2.26□□□□□ -2.05
SMC4-218ENST00000486711 ZNF443Q9Y2A4 671 aaPredicted RBP2.26□□□□□ -2.05
SMC4-218ENST00000486711 U3KQK5 164 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 MIA3Q5JRA6 1907 aa2.26□□□□□ -2.05
SMC4-218ENST00000486711 C9J4A7 227 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 MKRN2OSH3BPM6 223 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 MPZL2O60487 215 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 PSKH1P11801 424 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 EVI2BP34910 448 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 DYNLL1P63167 89 aaKnown RBP2.25□□□□□ -2.05
SMC4-218ENST00000486711 SKP2Q13309 424 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 EXOC3L4Q17RC7 722 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 CYHR1Q6ZMK1 362 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 TCF23Q7RTU1 214 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 FAM19A3Q7Z5A8 133 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 MTERF4Q7Z6M4 381 aaKnown RBP2.25□□□□□ -2.05
SMC4-218ENST00000486711 KRTCAP2Q8N6L1 136 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 LY6G5BQ8NDX9 201 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 KCTD4Q8WVF5 259 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 FAM210AQ96ND0 272 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 ZNF251Q9BRH9 671 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 TSSK6Q9BXA6 273 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 BBS2Q9BXC9 721 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 ARL6Q9H0F7 186 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 SHROOM3Q8TF72 1996 aa2.25□□□□□ -2.05
SMC4-218ENST00000486711 RAB3GAP2Q9H2M9 1393 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 F5H5K5 113 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 SH2D1AO60880 128 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 EPPINO95925 133 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 RD3LP0DJH9 198 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 STC1P52823 247 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 DLX6P56179 175 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 GTF2BQ00403 316 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 SLAMF1Q13291 335 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 ZNHIT3Q15649 155 aaPredicted RBP2.24□□□□□ -2.05
SMC4-218ENST00000486711 PYCR3Q53H96 274 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 CLEC6AQ6EIG7 209 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 ZBTB8OSQ8IWT0 167 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 OR11L1Q8NGX0 322 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 OR5P3Q8WZ94 311 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 HIST1H2BAQ96A08 127 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 POTEKPQ9BYX7 375 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 OR5V1Q9UGF6 321 aa2.24□□□□□ -2.05
SMC4-218ENST00000486711 TMEM213A2RRL7 107 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 SMLR1H3BR10 107 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 TOR1AO14656 332 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 SCN2BO60939 215 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 CDK14O94921 469 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 BRI3O95415 125 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 PET100P0DJ07 73 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 CTLA4P16410 223 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 F8A1P23610 371 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 PSMD7P51665 324 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 FAM3AP98173 230 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 WDR59Q6PJI9 974 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 TMPPEQ6ZT21 453 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 BOD1L2Q8IYS8 172 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 HS3ST5Q8IZT8 346 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 OR11G2Q8NGC1 345 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 OR5D18Q8NGL1 313 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 OR9I1Q8NGQ6 314 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 GALMQ96C23 342 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 SMIM12Q96EX1 92 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 B9D2Q9BPU9 175 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 METTL17Q9H7H0 456 aaPredicted RBP2.23□□□□□ -2.05
SMC4-218ENST00000486711 TMEM216Q9P0N5 145 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 RPUSD1Q9UJJ7 312 aaKnown RBP2.23□□□□□ -2.05
SMC4-218ENST00000486711 PHLDA3Q9Y5J5 127 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 PIK3R4Q99570 1358 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 PLXNB3Q9ULL4 1909 aa2.23□□□□□ -2.05
SMC4-218ENST00000486711 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 IGHV3OR15-7A0A075B7D8 119 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 B4DEV8 164 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 F5H5T6 163 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 K7EQS6 105 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 SYNGR1O43759 233 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 CALUO43852 315 aaPredicted RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 NDUFS6O75380 124 aaKnown RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 CDS2O95674 445 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 OPN1SWP03999 348 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 FBP1P09467 338 aa2.22□□□□□ -2.05
SMC4-218ENST00000486711 PSMA1P25786 263 aaKnown RBP2.22□□□□□ -2.05
SMC4-218ENST00000486711 CRABP1P29762 137 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms