RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C6orf183Q5T699 404 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 LIPKQ5VXJ0 399 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 GLT8D1Q68CQ7 371 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 RAB12Q6IQ22 244 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 CCBE1Q6UXH8 406 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-208ENST00000486404 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 CCDC107Q8WV48 283 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 PHYHIPQ92561 330 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 SGCDQ92629 289 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 LEAP2Q969E1 77 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 CNBD2Q96M20 576 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 ETAA1Q9NY74 926 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 LSM2Q9Y333 95 aaKnown RBP10.36□□□□□ -0.75
CHMP3-208ENST00000486404 WNK1Q9H4A3 2382 aa10.36□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A10PA6NDY2 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A18PA6NE21 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A16PA6NEW6 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A20PA6NIJ5 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A22PA8MWA6 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A12PA8MX19 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A5PA8MXJ8 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 J3QR06 171 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 SDCBPO00560 298 aaPredicted RBP10.35□□□□□ -0.75
CHMP3-208ENST00000486404 PIN1P1O15428 100 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FBXO24O75426 580 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 TSPAN15O95858 294 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A15PP0C7V4 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A13PP0C7W8 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A14PP0C7W9 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM90A24PP0C7X0 464 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 UBBP0CG47 229 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 CD24P25063 80 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 INSL4Q14641 139 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 NKAPLQ5M9Q1 402 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 FAM27D1Q5T7N8 215 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 ZNF497Q6ZNH5 498 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 CEACAM19Q7Z692 300 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 C11orf44Q8N8P7 122 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 ARL11Q969Q4 196 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 SLC25A33Q9BSK2 321 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 LIN7BQ9HAP6 207 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 RCC2Q9P258 522 aaKnown RBP10.35□□□□□ -0.75
CHMP3-208ENST00000486404 GHRLQ9UBU3 117 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 TRAPPC2LQ9UL33 140 aa10.35□□□□□ -0.75
CHMP3-208ENST00000486404 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 SPINT2O43291 252 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 MPIG6BO95866 241 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 CGB3P0DN86 165 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 CGB7P0DN87 165 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 GZMHP20718 246 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 PSMA1P25786 263 aaKnown RBP10.34□□□□□ -0.75
CHMP3-208ENST00000486404 IL3RAP26951 378 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 IRF3Q14653 427 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 TRAM1Q15629 374 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 TRAT1Q6PIZ9 186 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 SLC16A12Q6ZSM3 486 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 TMEM104Q8NE00 496 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 TMEM203Q969S6 136 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 Q96M66 194 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 DUSP21Q9H596 190 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 LINC00574Q9H8X3 128 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 GNG12Q9UBI6 72 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 PSG11Q9UQ72 335 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 PEX16Q9Y5Y5 336 aa10.34□□□□□ -0.75
CHMP3-208ENST00000486404 A0A1W2PPE3 182 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 HSD17B6O14756 317 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 PDCD6O75340 191 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 CA11O75493 328 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 OR2F2O95006 317 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 FAM106CPP0CH98 169 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 FUT3P21217 361 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 CRHBPP24387 322 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 RAB7AP51149 207 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
CHMP3-208ENST00000486404 MLLT11Q13015 90 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-208ENST00000486404 HES1Q14469 280 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 TMEM95Q3KNT9 176 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 UTF1Q5T230 341 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 PRSS48Q7RTY5 328 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 Q8N2B8 174 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 PRR18Q8N4B5 295 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 OR4K15Q8NH41 348 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 OR56B4Q8NH76 319 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-208ENST00000486404 NEDD4LQ96PU5 975 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 PLGRKTQ9HBL7 147 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 MOB4Q9Y3A3 225 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
CHMP3-208ENST00000486404 IGHV3-43A0A0B4J1X8 118 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 UBE2QL1A1L167 161 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 LY6LH3BQJ8 138 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 M0QZK8 103 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ORC5O43913 435 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ARL6IP5O75915 188 aa10.32□□□□□ -0.76
CHMP3-208ENST00000486404 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms