RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 GPR176Q14439 515 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 MPV17LQ2QL34 196 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 TCTEX1D4Q5JR98 221 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 C11orf87Q6NUJ2 197 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 C10orf99Q6UWK7 81 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 PQLC1Q8N2U9 271 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 SLC29A1Q99808 456 aa10.52□□□□□ -0.73
UBA3-210ENST00000485424 FGF20Q9NP95 211 aaPredicted RBP10.52□□□□□ -0.73
UBA3-210ENST00000485424 SMPD3Q9NY59 655 aaPredicted RBP10.52□□□□□ -0.73
UBA3-210ENST00000485424 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
UBA3-210ENST00000485424 STAB2Q8WWQ8 2551 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 TRAV39A0A0B4J263 110 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 A0A1W2PPE3 182 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 A0A1W2PPI3 338 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A18PA6NE21 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A16PA6NEW6 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A20PA6NIJ5 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A9PA6NNJ1 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 NCBP2LA6PVI3 153 aaKnown RBP10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A12PA8MX19 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A5PA8MXJ8 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 NPIPB11E5RHQ5 1161 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 CCRL2O00421 344 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A15PP0C7V4 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A13PP0C7W8 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A14PP0C7W9 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 FAM90A24PP0C7X0 464 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 GTF2F2P13984 249 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 ETV1P50549 477 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 PAX5Q02548 391 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 RIPK1Q13546 671 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 OR2G6Q5TZ20 316 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 ZNF529Q6P280 563 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 ZNF329Q86UD4 541 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 C5orf56Q8N8D9 126 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 APH1BQ8WW43 257 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 ARL11Q969Q4 196 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 SMIM19Q96E16 107 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 RDH12Q96NR8 316 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
UBA3-210ENST00000485424 IL36GQ9NZH8 169 aa10.51□□□□□ -0.73
UBA3-210ENST00000485424 MCRIP1C9JLW8 97 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 AIPO00170 330 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 GEMIN2O14893 280 aaKnown RBP10.5□□□□□ -0.73
UBA3-210ENST00000485424 KRTAP10-11P60412 298 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 ZNF816Q0VGE8 651 aaPredicted RBP10.5□□□□□ -0.73
UBA3-210ENST00000485424 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
UBA3-210ENST00000485424 SLC22A6Q4U2R8 563 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 NHLRC3Q5JS37 347 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 UTF1Q5T230 341 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 COMMD1Q8N668 190 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 SETD9Q8NE22 299 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 KLHL30-AS1Q8NEE0 82 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 CYGBQ8WWM9 190 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 RGP1Q92546 391 aaPredicted RBP10.5□□□□□ -0.73
UBA3-210ENST00000485424 ZNF184Q99676 751 aaPredicted RBP10.5□□□□□ -0.73
UBA3-210ENST00000485424 GON7Q9BXV9 100 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 LINC00574Q9H8X3 128 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 SPACA1Q9HBV2 294 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBA3-210ENST00000485424 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 BABAM2Q9NXR7 383 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 TRAPPC2LQ9UL33 140 aa10.5□□□□□ -0.73
UBA3-210ENST00000485424 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 WI2-2373I1.2A0A1W2PRP0 233 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 EBAG9O00559 213 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 SLC6A1P30531 599 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 REG1BP48304 166 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 RPL23AP62750 156 aaKnown RBP10.49□□□□□ -0.73
UBA3-210ENST00000485424 DIAPH2-AS1Q14236 149 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 TTC23Q5W5X9 447 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 XAF1Q6GPH4 301 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 UNQ9370/PRO34162Q6UXP9 181 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 JAGN1Q8N5M9 183 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 Q8NFD4 153 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 OR52M1Q8NGK5 317 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 TMEM80Q96HE8 168 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 NOL4LQ96MY1 436 aaPredicted RBP10.49□□□□□ -0.73
UBA3-210ENST00000485424 LINC00527Q9UJ94 153 aa10.49□□□□□ -0.73
UBA3-210ENST00000485424 SORL1Q92673 2214 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 IGHV3-43A0A0B4J1X8 118 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 IGHV3-72A0A0B4J1Y9 119 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 AP4M1O00189 453 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 OGG1O15527 345 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 SPINT2O43291 252 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 TXNL1O43396 289 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 ORC5O43913 435 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 IGHV3-43DP0DP04 118 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 THBS3P49746 956 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 RAB25P57735 213 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 Q499Y3 187 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 YIF1BQ5BJH7 314 aa10.48□□□□□ -0.73
UBA3-210ENST00000485424 C6orf183Q5T699 404 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms